Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2355 ATGGACAGCACAAGAGGAAGAGGCAAAATAAAAGAAGAAAGTCAACAAGGGAATCGTCAAGTTCTTGGAGACATTGGTAATTTGGAGGCGTTTAGTATTGCGGAAGGGAAGCAGATTTTGCGGCCAGTTAAAAGGAGGTTACTTGCAAAACTGTTGGAGAATGAACAAACTAATCCAGTGTTAGAAGTCCAAGCTAATGAGCAAGGAGCTGCACAAGGGAATAAACATGTAGTCGTAGCTGCACTAGACAAAAATGCAATTGTTCACCAGGAACACTATGTAGAAGATTTATTTCACAAGCTAAATCCTGAGCTTGCAGATGTGGTTGGTTTTGAAGCTAGAAAAAAGGCTGCTTCAGGAATCTTGGTTGAAGGTGAGGATCAGCCTGTTGACATTGATGCAAATGACGCAAATGAAGTGGTAGTAGCTGAATACCTTGATGACATGTACAAATTCTATAAGCTAACAGAAGAAGATTATCAAGCTTTGGATTACATGAAATCACAACATAATATTAATGAGATGATGAGGTCTATCACTGTGGATTGGCTGGTTGATGTCCATATGAAATTCAAATTTAAGCCTGAGACGCTCTATCTTACTGTAAATATAATTGATCGATATCTCTCATTAACAATTGTGTCAAAAGAAGAATTGCAGTTAGTGGGCATAGGCTCAATGCTCCTAGCTTGCAAATATGAAGAGATATGGTCTCCTCAGGTGAAAGACTTTGTTAGCATATCAGATAATGCTTACACCAACAATCGAATTCTTTCCATGGAGAAAACAATTCTTGAGAAATTAGAATGGCATTTAACAATCCCCACACTCTATGTCTTTCTGGTTCGATTTATCAGGGCTTCTGGTTTGCTAGATCAGCTGGTAGAGAACATGGCATATTTCCTGGCCGAACTTGGTCTCACGCACTATAAAGTCGCCATCTTCTACTGTCCTTCAATGACTGCTGCAGCTGCTGTCTATGCTGCTCGCTGCACACTCAATAGAAGACCTTTCTGGACGGAAATTCTCATGTACAAGGCTGGATACAGATCAGAACAAATTAGATGA 1068 0.3989 MDSTRGRGKIKEESQQGNRQVLGDIGNLEAFSIAEGKQILRPVKRRLLAKLLENEQTNPVLEVQANEQGAAQGNKHVVVAALDKNAIVHQEHYVEDLFHKLNPELADVVGFEARKKAASGILVEGEDQPVDIDANDANEVVVAEYLDDMYKFYKLTEEDYQALDYMKSQHNINEMMRSITVDWLVDVHMKFKFKPETLYLTVNIIDRYLSLTIVSKEELQLVGIGSMLLACKYEEIWSPQVKDFVSISDNAYTNNRILSMEKTILEKLEWHLTIPTLYVFLVRFIRASGLLDQLVENMAYFLAELGLTHYKVAIFYCPSMTAAAAVYAARCTLNRRPFWTEILMYKAGYRSEQIR* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2355 355 Gene3D - 162 273 - -
Apr2g2355 355 PANTHER CYCLINS 13 354 IPR039361 -
Apr2g2355 355 SUPERFAMILY Cyclin-like 139 272 IPR036915 -
Apr2g2355 355 Gene3D - 148 354 - -
Apr2g2355 355 PIRSF Cyclin_A_B_D_E 2 355 IPR039361 -
Apr2g2355 355 SMART cyclin_7 182 266 IPR013763 -
Apr2g2355 355 SMART cyclin_7 279 355 IPR013763 -
Apr2g2355 355 Pfam Cyclin, C-terminal domain 275 355 IPR004367 -
Apr2g2355 355 Pfam Cyclin, N-terminal domain 148 272 IPR006671 -
Apr2g2355 355 PANTHER CYCLIN-B1-4 13 354 - -
Apr2g2355 355 CDD CYCLIN 273 353 IPR013763 -
Apr2g2355 355 SUPERFAMILY Cyclin-like 274 354 IPR036915 -
Apr2g2355 355 CDD CYCLIN 176 265 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2355 Apr-Chr2 28354990 28359631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2355 18 354 Core Cell Cycle Gene Families AT3G11520 46.797 3.59e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2355 K21777 - jre:109013760 342.813