Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2348 ATGGAGGAGCTGAAACCACTGAAAGTGTTAGGGAAAGGAGCAATGGGAACAGTGTTTCTGGTTCAACACAACACAGCCCACGTGGCACTCAAAGTGGTAGACAAAACCTCTTCAATCCACGACGGGTCACGCCGAGCACGCTGGGAAATGCAACTCCTATCTCGCTTCTCGCACCCGTTCCTCCCCACCCTGTTGGGCTCCTTCGAAACCCAAAACCTATTGGGCTGGGCCATCCCATACTGCCCCGGCTCCGACCTCAACATCCTCCGTTACCGCCAAACGGATCGCGTATTCGCTCCCCCCGTTATACGCTTCTACGTGGCGGAAATCCTCTGCGCTCTCGAACACCTACACTCCATGGGCATCGCCTACCGCGACCTCAAACCTGAAAACGTTCTCATTCAACAATCCGGCCACGTCACCCTCACCGATTTCGACCTCTCTCGAACCCTCACACCCAAAACCATCACTCCCTCACACCACTCCAACATCCCTGATGACGACGCCCCCGGAAAACATCGCCGCAATTTTCGCTTCATGTGGATCCCAATCCACGCCAAGCCCAAGCCCAAGCCCGCCCGAGTCAGCCCAGTCAGTCGACGCAGGCCGAGTTTCTCCAACGGCGAACGCTCCAACTCCTTCGTCGGCACCGAGGAGTACGTCGCGCCGGAGGTCGTCCGTGGCGACGGTCACGAGTTCGCCGTTGACTGGTGGGCCCTCGGAGTGCTCACCTACGAGATGCTCTACGGCACGACGCCGTTCAAGGGGAACAACCGCAAGGAAACGTTTCGAAACGTGCTTTTGAAAACGCCTGAGTTTATTGGGAAGAAATCTGCGTTGACGGACCTCATCGCGAGGTTGCTTGAGAAGGATCCCACAAGAAGATTGGGTTACGTTCGAGGCGCCAGCGAGATCAAGGAGCACGAGTTCTTCAGAGGGCTTAAGTGGGACCAGTTAACGGAGGTTATGCGCCCGCCATTTATTCCGTCCAGAGACGACGTTGTGTTGCCGGCGAAGCCGTTCACCGGTGGACTCGACATAAGGGGATACTTCCAGAGCTTGAAATCTCCACCGTCGTTGCCCCCTTCGCCGTTACCGTCGCCGTCTGATGCTGAGTTTGAGAGGAATGCTTCTTTACCAGAATTCTGA 1149 0.564 MEELKPLKVLGKGAMGTVFLVQHNTAHVALKVVDKTSSIHDGSRRARWEMQLLSRFSHPFLPTLLGSFETQNLLGWAIPYCPGSDLNILRYRQTDRVFAPPVIRFYVAEILCALEHLHSMGIAYRDLKPENVLIQQSGHVTLTDFDLSRTLTPKTITPSHHSNIPDDDAPGKHRRNFRFMWIPIHAKPKPKPARVSPVSRRRPSFSNGERSNSFVGTEEYVAPEVVRGDGHEFAVDWWALGVLTYEMLYGTTPFKGNNRKETFRNVLLKTPEFIGKKSALTDLIARLLEKDPTRRLGYVRGASEIKEHEFFRGLKWDQLTEVMRPPFIPSRDDVVLPAKPFTGGLDIRGYFQSLKSPPSLPPSPLPSPSDAEFERNASLPEF* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2348 382 Gene3D Transferase(Phosphotransferase) domain 1 85 156 - -
Apr2g2348 382 Gene3D Phosphorylase Kinase; domain 1 4 84 - -
Apr2g2348 382 SMART serkin_6 4 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2348 382 MobiDBLite consensus disorder prediction 188 211 - -
Apr2g2348 382 ProSiteProfiles Protein kinase domain profile. 4 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2348 382 Gene3D Transferase(Phosphotransferase) domain 1 208 330 - -
Apr2g2348 382 MobiDBLite consensus disorder prediction 353 382 - -
Apr2g2348 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Apr2g2348 382 PANTHER FLIPPASE KINASE 1-RELATED 2 358 - -
Apr2g2348 382 ProSitePatterns Protein kinases ATP-binding region signature. 10 31 IPR017441 GO:0005524
Apr2g2348 382 Pfam Protein kinase domain 7 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2348 382 Pfam Protein kinase domain 206 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2348 382 SUPERFAMILY Protein kinase-like (PK-like) 3 366 IPR011009 -
Apr2g2348 382 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 2 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2348 Apr-Chr2 28299263 28300879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2348 1 368 AGC Kinase Gene Family AT3G20830 59.481 3.60e-152 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr2g2348 Pkinase 4.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2348 - K08286 gmx:100802613 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2348 2 28299263 28300879 Apr2g2348 2 28299263 28300879 ECH
Apr2g2348 2 28299263 28300879 Apr5g0186 5 1681556 1683680 PCT