Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2339 ATGGCTGATAAGCAACAGTACCCATCAATTATACCAAAGTTTTCTCACCAGTTTCACTTGGGATCCAACCTTTCTCCACATGTTGCAACTTATTATGGAGGTTTAAAAGGGCCTGCTCTGTTTCAGCAACAGTTTTCATTCGAAAACTATTCAAATGCAGGGTTGCAACGTCCTGTCATGCCTGCACTCAAAGCTCCGGATTGTGTAGGCTCAGCAGTATTTGTCCCATCCCCATCAGAGAAAAGCTTTGCAAGCTTTGCCACTGATTTTCTCATGGGTGGAGTTTCAGCAGCAGTGTCCAAGAGTGCAGCTGCTCCTATCGAGCGTGTGAAGCTCCTAATCCAAAATCAAGATGAGATGATTAAGGCTGGTCGTCTCTCCGAACCTTACAAGGGCATTGGAGATTGTTTTGGCAGGACAATAAAAGACGAGGGATTTGTTTCATTATGGAGAGGGAATACTGCTAATGTTATTCGTTACTTTCCAACACAGGCATTGAACTTTGCGTTTAAAGACTACTTCAAGAGTCTGTTTAACTTCAAGAAAGACAGAGATGGATACTGGAAATGGCTTGGAGGTAACTTGGCATCCGGTGCTGCAGCGGGAGCTTCATCTTCGGTCTTTGTTTATTCACTGGATTATGCCCGAACCCGCCTTGCCAGCGATGCCAAGACTGGAAAGAAGGGTGGTGAGAGACAATTCAATGGTTTAGTGGACGTCTACAAGAAAACTTTTCAATCTGATGGTATTGCTGGCCTTTATCGTGGCTTTAACGTTTCTATTGTTGGAATCATTGTCTACCGCGGTTTATATTTTGGATTATATGATTCTTTGAAACCAGTGGTCTTATTGGGAACATTGCAGGATAGTTTCCTGGCTAGCTTTGCTTTGGGGTGGCTTGTTACAACTGGTTCTAGCGTTGCGTCCTATCCCTTCGACACTGTTCGCAGAAGAATGATGATGACATCGGGTGAAGCAATCAAATACAAGAGCTCTTTTGATGCATTCTCGCAAATTATCAAGAAAGAGGGTACAAAATCTCTTTTCAAGGGTGCTGGTGCAAACATTCTTCGTGCAGTTGCCGGTGCCGGCGTGCTTGCGGGTTATGACAAACTTCAGGTGCTTGTGCTGGGGAAAAAATATGGCTAA 1149 0.4421 MADKQQYPSIIPKFSHQFHLGSNLSPHVATYYGGLKGPALFQQQFSFENYSNAGLQRPVMPALKAPDCVGSAVFVPSPSEKSFASFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFVSLWRGNTANVIRYFPTQALNFAFKDYFKSLFNFKKDRDGYWKWLGGNLASGAAAGASSSVFVYSLDYARTRLASDAKTGKKGGERQFNGLVDVYKKTFQSDGIAGLYRGFNVSIVGIIVYRGLYFGLYDSLKPVVLLGTLQDSFLASFALGWLVTTGSSVASYPFDTVRRRMMMTSGEAIKYKSSFDAFSQIIKKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQVLVLGKKYG* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2339 382 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 382 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g2339 382 PANTHER ADP,ATP CARRIER PROTEIN, MITOCHONDRIAL 1 382 - -
Apr2g2339 382 Pfam Mitochondrial carrier protein 290 376 IPR018108 -
Apr2g2339 382 Pfam Mitochondrial carrier protein 85 181 IPR018108 -
Apr2g2339 382 Pfam Mitochondrial carrier protein 188 281 IPR018108 -
Apr2g2339 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 177 IPR018108 -
Apr2g2339 382 Gene3D Mitochondrial carrier domain 87 382 IPR023395 -
Apr2g2339 382 PRINTS Adenine nucleotide translocator signature 86 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g2339 382 PRINTS Adenine nucleotide translocator signature 130 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g2339 382 PRINTS Adenine nucleotide translocator signature 163 175 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g2339 382 PRINTS Adenine nucleotide translocator signature 189 202 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g2339 382 PRINTS Adenine nucleotide translocator signature 294 310 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g2339 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 289 375 IPR018108 -
Apr2g2339 382 SUPERFAMILY Mitochondrial carrier 83 371 IPR023395 -
Apr2g2339 382 PRINTS Mitochondrial carrier protein signature 89 102 IPR002067 GO:0055085
Apr2g2339 382 PRINTS Mitochondrial carrier protein signature 102 116 IPR002067 GO:0055085
Apr2g2339 382 PRINTS Mitochondrial carrier protein signature 152 172 IPR002067 GO:0055085
Apr2g2339 382 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Apr2g2339 382 PRINTS Mitochondrial carrier protein signature 254 272 IPR002067 GO:0055085
Apr2g2339 382 PRINTS Mitochondrial carrier protein signature 298 320 IPR002067 GO:0055085
Apr2g2339 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 281 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2339 Apr-Chr2 28227658 28231058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2339 1 382 Antiporters AT5G13490 74.674 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2339 K05863 - gmx:100800843 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2339 2 28227658 28231058 Apr2g2339 2 28227658 28231058 ECH