Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2333 ATGGCTTCAACACCTTCCAATGCAAAAGCCAAACTACGATCCCAATCGAATGCAAAAGCCTCACCTGCCATAACCCCGCTCACTCCCCAAACCCTACCTACTCGCAGATCCACACGCGCCAAGTCCCTCCTCTTCGATTCTCCCAAACCTCCCCACGCACCTTCTGAAAATTCACTTCAAACTCTGAAGGGAATCCCTCGTCGATGCATCAATTACGGTGAGGATTCTAGCAAAGAAAAACTCACAACCCGCACAAGTGCAGCTAGAACAAACGGTTCAATTGATGCATCGAAGAAGCGAAATGGGAAGGTTTCCGTCGATGTTTCGCTCGCTCCGGCATCGCCTGAACAATCTGAGAAAACCAAGAAGAGGAAGAGGGAGGGTGAGGGAACGGTTGTTACTAGAGCTATGGCTGCGAGAAGAGGGGAATCGGCGAATCGGGGAAAGAGGGCGAGATTGCCCGAGAAGCGTGTATATTACAAAAAAGTGGTTTACGATGGGGGAGAATTTGAAGTGGGGGATGATGTTTATGTGAAGAGGAGAGAAGATGCTAGCTCTGATGACGAAGATCCCGAAGTGGAGGAGTGTAGGTTGTGTTTTTTCTCCGGCGATGAGATTATGATTGAGTGCGACAATTGTTTAGGTGGGTTTCATTTGCGATGCTTGACGCCGCCATTGAAGGATGTTCCTGAAGGGGATTGGGTATGTGGATTCTGTGAGGCTAGTAAGATGGGTAGGGATGTTAATTTTCCAAAGCCTCCTGAGGGAAAGAAGCTGGCTAGAACAATGAGGCAGAAGCTTCTTTCAAGTGATTTGTGGGCTTCTCATATTGAAAGTATATGGAAAGAGACAGATGGCAACTATTGGTGTCGGGTGCGGTGGTATATGATCCCAGAAGAGACTTCTGTCGGGAGACAACCACATAACCTGAGCAGGGAGCTATATCGAACTAATGATTTTGCAGACATTGAGATGGAATCTGTCCTTAGACATTGCTATGTCATGATCCCCAAAGAGTATGCTAAAGCTAGCGATGCAGGAGACGACATTTTCTTATGTGAATATGAATATGACATCCATTGGCACAGCTTCAAACGTCTTGCTGATATTGACAATAAAAGAGAGACTGACAGTGACGAAGATTGGAATCTTGACAAGGAATCAGATTCTGATACAGATGATGTTGAATATGAAGAAGAAAATATTAGAAATGCACAATTTCAGCCATCAACAAACCATCAGTTAGCTGCAAATCTGCACAAGGGACAGTTCTTTGGACTTCAGAAGATAGGCACAAAGAAAATTCCTGAGCATGTAAGGTCTCACAAACAGACAGATCTTGAGAGAGCAAAGGCTACTTTGTTGTTAGCATCGCAGCCTAAATCTTTACCTTGTAGAAATAAAGAAATGGAGGAGATAACTACATTCATCAAAGGTGCTATTTCTGATGATCAATGTCTGGGGCGTTGCCTCTACATTCATGGTGTTCCAGGAACTGGCAAGACCATGAGTGTACTAGCAGTAATGAGAAGTCTGAGGTCAGAAGTTGATGCAGGAAATATCAAACCCTACTGTTTTGTGGAGATTAATGGTCTGAAATTGGCATCACCAGAGAATATTTATAGGGTCATATATGAGGCATTAAATGGGCACAGGGTCAGCTGGAAAAAGGCTCTCTACTTGCTAAATGAGAGATTTGTAGAGGGGAAGAAAACTGGAGAAGAGGCTGACCGGCCATGTATTTTGCTTATTGATGAACTTGATCTTCTAGTTACCAGAAACCAGTCGGTTCTGTATAATATTCTTGACTGGCCTACTAAGCCACATTCCAAGCTAATTGTGATAGGGATAGCAAATACTATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGTCGAATGGGCATACAGAGACTTTGCTTTGGCCCATATAATTACCAGCAGCTTCAAGAAATAATTTCAAGTCGCCTCAAGGGAATTGATGTCTTTGAAAAGCAAGCTATAGAATTTGCTTCAAGAAAGGTTGCAGCAATCTCAGGAGATGCGCGTCGTGCGTTGGAGATATGCAGACGTGCAGCTGAAATAGCGGATTATCGTATGAAGCTAATTTCAAATCCTGATTTTGGAAATGTTGGAATGGCAGATGTTGAAGCAGCCATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTTATGAAAAGCTGTTCTAGACTTAGCAAAATTTTCCTAACAGCTATGGTGCACGAGCTTTATAAAACAGGAATGGGAGAAACCACTTTTGAAAAGTTGGCAATGACGGTTTCATGTCTCTGTACCAGCAACGGAGAAGTGTTTCCTGGATATGATACTCTCTTGCAAGTTGGCTGTAAGCTAGGCGAATGCAGGATTATTTTATGCGAAGCAGGTGCCAAGCACAGGTTGCAAAAATTGCAGCTCAATTTCCCGAGTGATGATGTGGCCTTTGCGCTGAGAGACTGCAAAGATCTACCTTGGTTGTCGAAGTATCTAATGTAG 2517 0.4358 MASTPSNAKAKLRSQSNAKASPAITPLTPQTLPTRRSTRAKSLLFDSPKPPHAPSENSLQTLKGIPRRCINYGEDSSKEKLTTRTSAARTNGSIDASKKRNGKVSVDVSLAPASPEQSEKTKKRKREGEGTVVTRAMAARRGESANRGKRARLPEKRVYYKKVVYDGGEFEVGDDVYVKRREDASSDDEDPEVEECRLCFFSGDEIMIECDNCLGGFHLRCLTPPLKDVPEGDWVCGFCEASKMGRDVNFPKPPEGKKLARTMRQKLLSSDLWASHIESIWKETDGNYWCRVRWYMIPEETSVGRQPHNLSRELYRTNDFADIEMESVLRHCYVMIPKEYAKASDAGDDIFLCEYEYDIHWHSFKRLADIDNKRETDSDEDWNLDKESDSDTDDVEYEEENIRNAQFQPSTNHQLAANLHKGQFFGLQKIGTKKIPEHVRSHKQTDLERAKATLLLASQPKSLPCRNKEMEEITTFIKGAISDDQCLGRCLYIHGVPGTGKTMSVLAVMRSLRSEVDAGNIKPYCFVEINGLKLASPENIYRVIYEALNGHRVSWKKALYLLNERFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQAIEFASRKVAAISGDARRALEICRRAAEIADYRMKLISNPDFGNVGMADVEAAIQEMFQAPHIQVMKSCSRLSKIFLTAMVHELYKTGMGETTFEKLAMTVSCLCTSNGEVFPGYDTLLQVGCKLGECRIILCEAGAKHRLQKLQLNFPSDDVAFALRDCKDLPWLSKYLM* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2333 838 MobiDBLite consensus disorder prediction 117 131 - -
Apr2g2333 838 MobiDBLite consensus disorder prediction 1 131 - -
Apr2g2333 838 Pfam PHD-finger 196 241 IPR019787 -
Apr2g2333 838 Pfam AAA lid domain 665 698 IPR041083 -
Apr2g2333 838 Pfam BAH domain 277 365 IPR001025 GO:0003682
Apr2g2333 838 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 119 833 - -
Apr2g2333 838 SMART AAA_5 487 641 IPR003593 -
Apr2g2333 838 Gene3D - 443 638 IPR027417 -
Apr2g2333 838 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 119 833 IPR020793 -
Apr2g2333 838 ProSitePatterns Zinc finger PHD-type signature. 196 239 IPR019786 -
Apr2g2333 838 ProSiteProfiles Zinc finger PHD-type profile. 193 242 IPR019787 -
Apr2g2333 838 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 252 IPR013083 -
Apr2g2333 838 SMART PHD_3 195 240 IPR001965 -
Apr2g2333 838 MobiDBLite consensus disorder prediction 375 397 - -
Apr2g2333 838 Gene3D - 140 384 IPR043151 -
Apr2g2333 838 MobiDBLite consensus disorder prediction 382 397 - -
Apr2g2333 838 Pfam ATPase family associated with various cellular activities (AAA) 492 637 IPR003959 GO:0005524|GO:0016887
Apr2g2333 838 MobiDBLite consensus disorder prediction 1 41 - -
Apr2g2333 838 SUPERFAMILY FYVE/PHD zinc finger 182 244 IPR011011 -
Apr2g2333 838 MobiDBLite consensus disorder prediction 83 98 - -
Apr2g2333 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 457 700 IPR027417 -
Apr2g2333 838 Gene3D - 639 727 - -
Apr2g2333 838 SMART BAH_4 227 368 IPR001025 GO:0003682
Apr2g2333 838 ProSiteProfiles BAH domain profile. 251 368 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2333 Apr-Chr2 28177912 28184293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2333 4 837 Core DNA Replication Machinery Family AT4G14700 63.314 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Apr2g2333 AAA 1.2e-19 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2333 K02603 - gmx:100798547 1388.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2333 2 28177912 28184293 Apr2g2333 2 28177912 28184293 ECH