Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2329 ATGGGAGGTTGTTGCTGTAAATTGTGTCTATGGTGTTACCCCTCCAACACCCAATCCAATCTTCAAGACTTACCAGACATCGAGTTCAGCTTGGACCAACTGAAAACTGCCACGTCAGGATTCTCACCCGATAACATTGTTTCAGAACATGGTGAGAAGGCTCCCAATGTTGTCTACAAAGGAAAGATCGAAGATGATAGATTGGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATTCTCGACAGTTCATAGAGGAAGCACGTGCAGTGGGGCAGCTAAGGAATGAGCGGTTAGCTAACTTGGTTGGTTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTGCAGAGTTTATGCCCAATGAAACTCTCTCCAAACATCTCTTTCACTGGGAAACACAGCCCATGAAATGGGCAATGAGGCTGAGAGTGGCCTTGTGTTTAGCACAAGCATTGGAATATTGCAGCAGTAGAGGAAGGGCATTGTATCATGATCTTAATGCTTATAGAATTTTGTTTGATCAGGATGGCAACCCTCGGCTTTCTTGTTTTGGACTCATGAAAAACAGCAGGGATGGCAGAAGCTACAGTACAAATTTAGCCTTCACCCCTCCTGAGTATTTGAGGACCGGAAGAATCACCCCAGAAAGTGTAATTTACAGTTTTGGCACACTCTTGCTTGATCTTCTGAGTGGCAAGCATATTCCACCCAGTCATGCACTTGACCTTATACGGGGCAAAAATTTTCTGATGCTGATGGACTCATGTTTGGAAGGTCATATTTCAAATGATGATGGAACTGAAATAGTGAGATTAGCTTCGCGTTGTCTACAGTATGAACCTCGTGAGAGGCCAAATGCCAAGTCACTTGTGACTGCTCTAACTCCCCTTCAGAAAGAAACTACAGTTCCATCACATGTTTTGTTGGGCATTCCAGATGAGAGTGCCCCATCAAAGGAAGCAGTTCCGTTGACACCTTTTGGTGAAGCTTGTTCTAGAAGGGATCTCACTTCAATTTATGAAATTTTGGAAAGGGTGGGGTACAAGGATGATGAAGATGTTGCAAATGAGCTTTCCTTCCAAATGTGGACGGATCAAATACAAGAAATATTAAATTATAAGAAGCAAGGAGATTCTGCTTTCCATGCCAGAGACTTCTCTAAGGCCATTGACTGCTATACACAATTCATCGATGGTGGGACCATGGTATCCCCAACTGTGTATGCAAGGAGGTGCTTTTGTTACCTGATGAACAACATGGCACAAGAAGCACTAGGAGATGCCATGCAAGCTCAATCAGTATCACCCACTTGGCCAACTGCATTCTATCTTCAAGCAGTGGCCCTTTTCAGCCTTGGGATGGACCATGATGCGGAGGAAAGTCTTAAAGATGGCACAACACTGGAAACCAGAAAACAGAGAAAATCAAATTGA 1437 0.4412 MGGCCCKLCLWCYPSNTQSNLQDLPDIEFSLDQLKTATSGFSPDNIVSEHGEKAPNVVYKGKIEDDRLVAVKRFNKSAWPDSRQFIEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVALCLAQALEYCSSRGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHISNDDGTEIVRLASRCLQYEPRERPNAKSLVTALTPLQKETTVPSHVLLGIPDESAPSKEAVPLTPFGEACSRRDLTSIYEILERVGYKDDEDVANELSFQMWTDQIQEILNYKKQGDSAFHARDFSKAIDCYTQFIDGGTMVSPTVYARRCFCYLMNNMAQEALGDAMQAQSVSPTWPTAFYLQAVALFSLGMDHDAEESLKDGTTLETRKQRKSN* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2329 478 Gene3D Phosphorylase Kinase; domain 1 16 119 - -
Apr2g2329 478 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 476 IPR045845 GO:0004672|GO:0009742
Apr2g2329 478 SUPERFAMILY TPR-like 371 466 IPR011990 GO:0005515
Apr2g2329 478 ProSiteProfiles Protein kinase domain profile. 44 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2329 478 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 476 - -
Apr2g2329 478 Gene3D Tetratricopeptide repeat domain 368 478 IPR011990 GO:0005515
Apr2g2329 478 Gene3D Transferase(Phosphotransferase) domain 1 121 312 - -
Apr2g2329 478 SUPERFAMILY Protein kinase-like (PK-like) 25 302 IPR011009 -
Apr2g2329 478 Pfam Protein tyrosine and serine/threonine kinase 58 295 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2329 Apr-Chr2 28144773 28148797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2329 29 295 Glycoside Hydrolase AT3G07070 34.237 2.79e-40 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Apr2g2329 PK_Tyr_Ser-Thr 3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2329 - - gmx:100804210 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2329 2 28144773 28148797 Apr2g2329 2 28144773 28148797 ECH