Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr2g2329 | ATGGGAGGTTGTTGCTGTAAATTGTGTCTATGGTGTTACCCCTCCAACACCCAATCCAATCTTCAAGACTTACCAGACATCGAGTTCAGCTTGGACCAACTGAAAACTGCCACGTCAGGATTCTCACCCGATAACATTGTTTCAGAACATGGTGAGAAGGCTCCCAATGTTGTCTACAAAGGAAAGATCGAAGATGATAGATTGGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATTCTCGACAGTTCATAGAGGAAGCACGTGCAGTGGGGCAGCTAAGGAATGAGCGGTTAGCTAACTTGGTTGGTTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTGCAGAGTTTATGCCCAATGAAACTCTCTCCAAACATCTCTTTCACTGGGAAACACAGCCCATGAAATGGGCAATGAGGCTGAGAGTGGCCTTGTGTTTAGCACAAGCATTGGAATATTGCAGCAGTAGAGGAAGGGCATTGTATCATGATCTTAATGCTTATAGAATTTTGTTTGATCAGGATGGCAACCCTCGGCTTTCTTGTTTTGGACTCATGAAAAACAGCAGGGATGGCAGAAGCTACAGTACAAATTTAGCCTTCACCCCTCCTGAGTATTTGAGGACCGGAAGAATCACCCCAGAAAGTGTAATTTACAGTTTTGGCACACTCTTGCTTGATCTTCTGAGTGGCAAGCATATTCCACCCAGTCATGCACTTGACCTTATACGGGGCAAAAATTTTCTGATGCTGATGGACTCATGTTTGGAAGGTCATATTTCAAATGATGATGGAACTGAAATAGTGAGATTAGCTTCGCGTTGTCTACAGTATGAACCTCGTGAGAGGCCAAATGCCAAGTCACTTGTGACTGCTCTAACTCCCCTTCAGAAAGAAACTACAGTTCCATCACATGTTTTGTTGGGCATTCCAGATGAGAGTGCCCCATCAAAGGAAGCAGTTCCGTTGACACCTTTTGGTGAAGCTTGTTCTAGAAGGGATCTCACTTCAATTTATGAAATTTTGGAAAGGGTGGGGTACAAGGATGATGAAGATGTTGCAAATGAGCTTTCCTTCCAAATGTGGACGGATCAAATACAAGAAATATTAAATTATAAGAAGCAAGGAGATTCTGCTTTCCATGCCAGAGACTTCTCTAAGGCCATTGACTGCTATACACAATTCATCGATGGTGGGACCATGGTATCCCCAACTGTGTATGCAAGGAGGTGCTTTTGTTACCTGATGAACAACATGGCACAAGAAGCACTAGGAGATGCCATGCAAGCTCAATCAGTATCACCCACTTGGCCAACTGCATTCTATCTTCAAGCAGTGGCCCTTTTCAGCCTTGGGATGGACCATGATGCGGAGGAAAGTCTTAAAGATGGCACAACACTGGAAACCAGAAAACAGAGAAAATCAAATTGA | 1437 | 0.4412 | MGGCCCKLCLWCYPSNTQSNLQDLPDIEFSLDQLKTATSGFSPDNIVSEHGEKAPNVVYKGKIEDDRLVAVKRFNKSAWPDSRQFIEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVALCLAQALEYCSSRGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHISNDDGTEIVRLASRCLQYEPRERPNAKSLVTALTPLQKETTVPSHVLLGIPDESAPSKEAVPLTPFGEACSRRDLTSIYEILERVGYKDDEDVANELSFQMWTDQIQEILNYKKQGDSAFHARDFSKAIDCYTQFIDGGTMVSPTVYARRCFCYLMNNMAQEALGDAMQAQSVSPTWPTAFYLQAVALFSLGMDHDAEESLKDGTTLETRKQRKSN* | 479 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr2g2329 | 478 | Gene3D | Phosphorylase Kinase; domain 1 | 16 | 119 | - | - | |
Apr2g2329 | 478 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 1 | 476 | IPR045845 | GO:0004672|GO:0009742 | |
Apr2g2329 | 478 | SUPERFAMILY | TPR-like | 371 | 466 | IPR011990 | GO:0005515 | |
Apr2g2329 | 478 | ProSiteProfiles | Protein kinase domain profile. | 44 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr2g2329 | 478 | PANTHER | PROTEIN KINASE, PUTATIVE-RELATED | 1 | 476 | - | - | |
Apr2g2329 | 478 | Gene3D | Tetratricopeptide repeat domain | 368 | 478 | IPR011990 | GO:0005515 | |
Apr2g2329 | 478 | Gene3D | Transferase(Phosphotransferase) domain 1 | 121 | 312 | - | - | |
Apr2g2329 | 478 | SUPERFAMILY | Protein kinase-like (PK-like) | 25 | 302 | IPR011009 | - | |
Apr2g2329 | 478 | Pfam | Protein tyrosine and serine/threonine kinase | 58 | 295 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr2g2329 | Apr-Chr2 | 28144773 | 28148797 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr2g2329 | 29 | 295 | Glycoside Hydrolase | AT3G07070 | 34.237 | 2.79e-40 | 148 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Apr2g2329 | PK_Tyr_Ser-Thr | 3e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr2g2329 | - | - | gmx:100804210 | 877.856 |