Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2322 ATGGAGTCCAATGATCATATTCATGATACAACATCAGAAAAGGCCACCGATGGTGATGGTGAGCTAGATGGAAACAAAGTTATGAGAAGGTCCTATGAGTGCAATTTTTGCAAGAGGGGTTTCTCTAATGCACAAGCACTAGGAGGGCACATGAACATCCACAGGAAAGACAAGGCCAAGATCAAGCACACTTCATCAAATTCCAACCACACGCAACCACCTTATTCCTTGGACATTCATCATAAGGTCAAGCCTAGTGTTGAAAAGCAAAGCAACCCAAACTGGCCTTGGCATGGTGTTGATTCCTCAAAAGATGAAACCCATGTTGTTCACATCAAGAAACTCCCATTCTTTTTTGATTCACAAATGATTGGCTGCGAAACTCAAAAACCACAATATTGTCAAATTTCTGAGGAAAATATTGGTATCGAAAGTGAAATGGCTTTCCCATCTAGTCATGGTTCCTCATCGGAGTTAGACCTTGAACTAAGACTAGGGCCTCACCCTGAGGATTCATCACTTGTAACGGGTACCAGAAAATTCTTTTGA 549 0.4171 MESNDHIHDTTSEKATDGDGELDGNKVMRRSYECNFCKRGFSNAQALGGHMNIHRKDKAKIKHTSSNSNHTQPPYSLDIHHKVKPSVEKQSNPNWPWHGVDSSKDETHVVHIKKLPFFFDSQMIGCETQKPQYCQISEENIGIESEMAFPSSHGSSSELDLELRLGPHPEDSSLVTGTRKFF* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2322 182 MobiDBLite consensus disorder prediction 1 24 - -
Apr2g2322 182 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Apr2g2322 182 Gene3D Classic Zinc Finger 21 92 - -
Apr2g2322 182 Pfam C2H2-type zinc finger 32 56 - -
Apr2g2322 182 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Apr2g2322 182 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 173 - -
Apr2g2322 182 PANTHER OS07G0101800 PROTEIN 1 173 - -
Apr2g2322 182 SUPERFAMILY beta-beta-alpha zinc fingers 30 59 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2322 Apr-Chr2 28107918 28108466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2322 30 166 C2H2 Transcription Factor Family AT3G09290 33.813 5.60e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr2g2322 zf-C2H2_6 1.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2322 - - aprc:113855974 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2322 2 28107918 28108466 Apr2g2322 2 28107918 28108466 ECH