Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2316 ATGATAGAACAAAGATTTGGAGATAACATGCATGGATTTACTCTCTCTCTCACTGCAAACACCTTTCTTTCTTGTCCTCACACTCACCTTCCCTTCAGATCTCTTCCACCTCTTACTCCTTCTCCAATTTCTGCCATACCCAGTTGCAGAATCAGCTCTGCAAGTGGTTTCAATAATTCCCTTGTGCTCCATTCACTTTGGAAGCGTGAGAAGAAAGAAAGAGGTGGCAATAGAATGGTGGTTGTGAGAGCAAGGAGTGGCGAGTCTCCATATGAGGTTTTGGGTGTGTCTCCATCCGCAACTGTGGATGAAATCAAGAAGGCGTATCGGAAACTTGCTCTCAAGTATCATCCCGATGTCAATAAAGAGGATAAGGCACAGGAGAAGTTTATGAGGATAAAACATGCATACAATACATTGGTAAATTCCAGTTCTCGCAAAAAATATGATTCTGGAAATCGTGGTTCTGATTTTTCTCGAAGAAGCCGAAGTAGGAATGCACAAGCTGCTGAAGAAGAATTTTATGGATTAGGTAATTTTTTGAGGGATGTTCAAATATCAATAGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAATTGGGAAGCCAATGCTGCTTCACAAGGAAAGCCAAAGAGCCTATGGGAAGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAATATTACTGATGCAAATGACAATTATAAAACGCCTCAGGGAGGAAATGATTCTAACGTATCTGGGACAGAGATACCAAGGAATAATAGCACTCAAGGTGAAGCTAGCAAGGGAAACAAAAGTGTTGAGGATAACCTTGATGAAATAGAAGCAACACTTGCTCAGTTGAAAAAGGAGTTAGGCTTGTAG 891 0.4085 MIEQRFGDNMHGFTLSLTANTFLSCPHTHLPFRSLPPLTPSPISAIPSCRISSASGFNNSLVLHSLWKREKKERGGNRMVVVRARSGESPYEVLGVSPSATVDEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLVNSSSRKKYDSGNRGSDFSRRSRSRNAQAAEEEFYGLGNFLRDVQISIEDFFKDLQEEFRNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNITDANDNYKTPQGGNDSNVSGTEIPRNNSTQGEASKGNKSVEDNLDEIEATLAQLKKELGL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2316 296 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 67 294 - -
Apr2g2316 296 SMART dnaj_3 88 145 IPR001623 -
Apr2g2316 296 MobiDBLite consensus disorder prediction 144 165 - -
Apr2g2316 296 MobiDBLite consensus disorder prediction 150 165 - -
Apr2g2316 296 ProSiteProfiles dnaJ domain profile. 89 153 IPR001623 -
Apr2g2316 296 MobiDBLite consensus disorder prediction 239 273 - -
Apr2g2316 296 SUPERFAMILY Chaperone J-domain 78 149 IPR036869 -
Apr2g2316 296 Gene3D DnaJ domain 87 208 IPR036869 -
Apr2g2316 296 PRINTS DnaJ domain signature 91 109 IPR001623 -
Apr2g2316 296 PRINTS DnaJ domain signature 109 124 IPR001623 -
Apr2g2316 296 PRINTS DnaJ domain signature 125 145 IPR001623 -
Apr2g2316 296 ProSitePatterns Nt-dnaJ domain signature. 130 149 IPR018253 -
Apr2g2316 296 CDD DnaJ 90 140 IPR001623 -
Apr2g2316 296 Pfam DnaJ domain 90 150 IPR001623 -
Apr2g2316 296 Coils Coil 273 293 - -
Apr2g2316 296 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Apr2g2316 296 MobiDBLite consensus disorder prediction 238 280 - -
Apr2g2316 296 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 67 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2316 Apr-Chr2 28077363 28080763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2316 91 151 C2H2 Transcription Factor Family AT1G74250 41.791 5.98e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2316 - - gmx:100812972 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2316 2 28077363 28080763 Apr2g2316 2 28077363 28080763 ECH