Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2293 ATGGGAAAGCACATGATTTCTTCGGAGAATTCCACTGTTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTCAAATTCTTGATTACCATCGTTGGTGCGTCAAAAAGGTGTTTCCTCACAAAAAGAGAAGACATGCCAGATATAAGAGAAAAACCATTTTGGATAACCAAAATGAAGACCAACAATATGGAGTTACAGAAGCAGAACCCCTCCTTGCCAGGCAGCACAGCGAAAAAATTAGTGCCGCAGGCAAAAATTCCCCCAAAAATCGCAAAAAGGACCCACGCACTGACAAAAGGTTTAATGAAGAAAACTCTGAAGGCTGTAGTGAGTATGCACTTCAACTGGAGAAAGATGGCAAGACGACAGAAGCTGCCCTTAATCTTAAGCATATGGAAACAGACAAGCTTGACAGAGGCACGTCCAATAAATTTAAAAAGCATAGTGATGATGTTTCTGAGGTATTTAGAGTGGAGAAGGATTTATTAATCAAATTTCTACGAGATTTAGAAGTTGGTGGGAAAAAATTCCATCAAGCATCCCACAACAAAGCAAGATTGACAAAATCAGGGTCATTTCCTTTGACCTCAACTTCACAGATGAGAAACATTAGCTCTAGGTCCTTAAAACACAAGCAAAACGAAATTTGGGCATTTCCCAAGAGAGGAAAGTTTCTTGCAGGTACACAGGACAGTTTTGTGAAAGATATTTCTAATGAAAAGTCAATGCCTTTAGTGAATGATCTTGGTGTTGATAGTACCATGGAAGAAAAACCAAGCATTGATTTAAGGTCTTCTCAAGGATCAAATCACAAAGGGTGGAATCAACTGGTTCTTCATCAATTCAAAGTTATAAAACAGAAGATAAAACATGCCCTCGTGGAATTCAGAAAAAGTGGTTACCAAACTTCTGCCGTAGCAATCCACCACAGAGCTTCACCTGAACATAGCATCATCAATAATGAGGAAGAGATCTCACCATGCTTAGATGATGGCATGATTCAAGAACACAATCGGAACAAAAGCTCAAATGAAACTAAAGCTTCTGATTATGATTCCAACAAGCATGATGCTTGCCTCATGCGAAGAACATCCTCCTTAAATGAATCGTTGGATAGATATACTGAGCTGTTTGAGAAAATCAGCAAAGATGTTAAGTGGCAAAATTCAAAGTCTAAAAGCTTGAAATTGACAAACGAGGATAAAATCCACAAGAGTGGGCGTGCTCCTAGGTTTTCCAGAAGCAATTTGTCTCTGCCGAGTCTCGAGACTTTAGGCTTCATTCTACATGAGGCACTTTTTGATACAAATGATGTAGAAAACACAGTGGAAGCTGATAATCATGTTCAAAGAAAATCAGTGAGCTTTCCTTTAAGGATAGACAAATCACATGATCATTTTAAAGGGGCTGAAATTGTGGAAACAGTAGAAGGGAGTGACAGAGATGCAAATCCCAATCTTTCATCTGATAAGTTTATGGAAACAATTGATGAAGGAGTTACCTGTGACCAAGAGGAGGACATACATGAGCCAGCAGTGGGAGATGGAAGTTTACCCCACAAAAAGGAAGAAATATGTGTGATTACCAATCTTAACAAGGAGGTAATGGTCTCTCTTGAAACTAGCTATGAAGATAATACAACCAGACATTCAAAAGGTACAAGATTGAATACCCCAGGCTCTACATTGGAAGAATTGGAGAGTGATTTATCATATAAAGGAAGTGTATATCATTCTTTGCCAGACTCTTTATCCAACAGAAATGCTAGTGTAACAGCTGAAGACACAGACAAGAGTTCTGACAATCATTTCCTGCTCTTCAAATCAGATGAAGACAACGATTCCAATTTCAATTATGTGAAAAATGTTCTTGAATTTTCAGGTTTCTTGGGAATTGACCACATTCAGATGCGATACACAGTAGACCAGCCACTAAAGCCTTCCTTATTCAAAGCTTTGGATGTGACTTTGCGCCATGAAATTGAATCCTCCAGAGAAGAGACAATCAACCCCTATGATCACCAGCTTATTTTCAACTTAGTTAATGAGGTGCTTACTGAAATATATGAGAAGTCACCAACTTACTTCCCAAGGCCCTTCTCCTTCAACCGCCGCCTCCATCCAATTGCCAAAGGGGACTATCTTCTCAATGATGTATGGAGTGGTGTTAAGTCATACCTGAGCTTGAGACCAGAACTGGATCAGACACTAGATGATGTTGTGGGTCGTGATTTGGAAAAAAGAAGTGGCTGGATGATCCTTCAACAGGAAGAGGAGTGTGTAGCACTACAACTAGAGGAGATGATCATGGAAGATTTATTAGATGATATCTTCTCATGA 2349 0.3946 MGKHMISSENSTVQIQDNNPGCMWGMLQILDYHRWCVKKVFPHKKRRHARYKRKTILDNQNEDQQYGVTEAEPLLARQHSEKISAAGKNSPKNRKKDPRTDKRFNEENSEGCSEYALQLEKDGKTTEAALNLKHMETDKLDRGTSNKFKKHSDDVSEVFRVEKDLLIKFLRDLEVGGKKFHQASHNKARLTKSGSFPLTSTSQMRNISSRSLKHKQNEIWAFPKRGKFLAGTQDSFVKDISNEKSMPLVNDLGVDSTMEEKPSIDLRSSQGSNHKGWNQLVLHQFKVIKQKIKHALVEFRKSGYQTSAVAIHHRASPEHSIINNEEEISPCLDDGMIQEHNRNKSSNETKASDYDSNKHDACLMRRTSSLNESLDRYTELFEKISKDVKWQNSKSKSLKLTNEDKIHKSGRAPRFSRSNLSLPSLETLGFILHEALFDTNDVENTVEADNHVQRKSVSFPLRIDKSHDHFKGAEIVETVEGSDRDANPNLSSDKFMETIDEGVTCDQEEDIHEPAVGDGSLPHKKEEICVITNLNKEVMVSLETSYEDNTTRHSKGTRLNTPGSTLEELESDLSYKGSVYHSLPDSLSNRNASVTAEDTDKSSDNHFLLFKSDEDNDSNFNYVKNVLEFSGFLGIDHIQMRYTVDQPLKPSLFKALDVTLRHEIESSREETINPYDHQLIFNLVNEVLTEIYEKSPTYFPRPFSFNRRLHPIAKGDYLLNDVWSGVKSYLSLRPELDQTLDDVVGRDLEKRSGWMILQQEEECVALQLEEMIMEDLLDDIFS* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2293 782 MobiDBLite consensus disorder prediction 187 202 - -
Apr2g2293 782 PANTHER PROTEIN TRM32 1 781 - -
Apr2g2293 782 MobiDBLite consensus disorder prediction 88 109 - -
Apr2g2293 782 MobiDBLite consensus disorder prediction 545 564 - -
Apr2g2293 782 MobiDBLite consensus disorder prediction 182 202 - -
Apr2g2293 782 MobiDBLite consensus disorder prediction 337 356 - -
Apr2g2293 782 Pfam Domain of unknown function (DUF4378) 620 779 IPR025486 -
Apr2g2293 782 PANTHER PROTEIN TRM32 1 781 IPR044257 -
Apr2g2293 782 MobiDBLite consensus disorder prediction 82 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2293 Apr-Chr2 27932711 27937513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2293 620 773 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 38.750 1.78e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2293 - - gmx:100784103 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2293 2 27932711 27937513 Apr2g2293 2 27932711 27937513 ECH