Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2291 ATGGAGCTTTTGAACCCTTTGCTTCCTCCTCAGCCTCACCATGCACCCATTTTGCACCTTCCCTTTCACGGGGTTCCCTCTTCTTCTCGATCTCAATCTCAGGTTTCCTTTCCTATGGAAGAATCCTCTGGTAAGGTTCATGTAGCTGTTGGGAAATCCATAGAGAAAGCAGCTACCTTGCTTCAATGGGCTTTCACCCATTTTCGGAAAACAGAAATTATCATAATTCATGTTTATCAACCATCTCTCACCATCCCCACTCTATTGGGGAAATTGCCAGCATCACAGGCTAGTCCTCAAGTGGTGGCTGCCTTTCGAAGAGTGGAAAGAGAACAAACTATGAAGCTTTTGGACAAGTACTTGACAATTTGCCGCGCAGCTAAGGTTCAGGCGAGCGTTATTGTAACTGAAACTGACCAAGTCCAAAAAGGAATTGTTGATTTGGTTATTAGGCATAATATTAAGAAGCTTGTTATTGGAGCTGTACCAGAAAATTGCATCAAAGTGAAAAGGAATTCTGGTAAAGCAAACTACACTGCCAAAAATGCTCCCTCATTCTGTGAAGTATGGTTTATCTATAAAGGTAAACACATTTGGACAAGAGAGGCTTCTGAAACACCATGTTCCTTGTCTTCTTGTACTCAACATGATATTTCCACCACAGAAAGCTTGAGATGTAGATCTTTTCAATATGGTAACAATGAACTATGCCAATCAGAATATCTTCAACCAAATTCTGCAAGAACTACTACTAGTTCTGGAATTAGAAGTTGTGTTCAGGGGGAAATCATTGAAACTGGAGTCACTTTTTCATCCAAATCATCCAGTTGTAGCAGTCTTTGTTCCCCCCAAAATTTTTCAGGGGTTTATTTAGATACATATTTAGAGGTCATGGAAGAAAGAATTAACAACCAACTTACTGAAACCAAAAGGGAAGCTGAGGCAGCAACAGACGAAGCCTTTGCAGAGTTATTAAAGTGCAAGAGATTGGAAGTTGAAGCCATGGAGGCCATAAGGAAGGTCAATTTGTTTGAATCAGCCCATGCACATGAAGTAAAGCTCAGAAAAAAGGATGAGGATGCACTAAGAGCTGCAGTACAAGAACAACAGAAGCTCTTGGATGAGAGTGAAGAAATTGCTGGTGAGCTACAAATGACCATGAGAAATATTGCCCTACTAGATAGTCATGCTCAGGAAGCAAACCACCGGCGAGATGAAGCTGCAGATGAGTTATCACTGATTCAAGCATCCATCTCAACCCTATGGCCGGAGTGGCAGCATATCAGGAGGCAGAAAATGGAAGCCCTCCGCTGGCTTGAGCGGTGGAAAAGTCATGGACAAGTTGGAGCAGCTCAATGTGGGGTCATTGGATTTGCTGAAGAATTACCCGAGTTAGCAGAATTTTCATTATCAGATCTTCAAAATGCCACATGTAATTTTTCCAAGAGCTTTAAAATTACACAAGGCGGATACGGTTGTATATATAAGGGGGAAATATTGGGTAGGACTGTTGCTATAAAGAAGTTCCATCAACATAATGTGCAAGGACCAGTGGAGTTTCATCAAGAGGTTCAAGTTCTTGGTAATCTCCAGCATCCTCATTTAATCACTTTGCTTGGTGTTTGTCCTGAAGCTTGGTCAATTGTATATGAGTACCTCCCCAATGGAACTCTTCAAGACTACCTATTCCGGAAAAGCAATAACTTCCCTTTGACATGGAATATCCGAGCACGAATGATTGCTGAAATTGCCAGTGCACTATGCTTCTTACATTCTTCTAAACCTGAAACTATTATTCATGGTGATCTGAAGCCTGAAACTATACTACTTGATTCTTCACTTAGTTGCAAGATATGTGAATTTGGGTTCTGCAGGCTGGTGAATGAGGAGTCTCTCCTTCGTCCTAGTTTCCGTTTGAGCACTGAACCAAAGGGTGCTTTCACGTATACAGATCCTGAGTTTCAGAGAACTGGAATACTAACACCCAAGTCTGACATCTACTCTTTTGGGCTAATCATTTTGCAACTTCTTACTGGTAGGACTACAGTTGGATTAGCAGTTTTAGTACGCAACGCAGTTTCATGTGGAAAATTGTCTTCAATTCTGGATTCTTCAGCTGGAGAATGGCCTTCAGCTGTGGCAACACGATTGGCTGAACTAGGATTGCAATGCTGTCAACAAAGTCGTAGAGACAGACCAGAGTTAACACCTACTTTAGTGAGAGAATTGGAGCAGTTACATGCTTCAGAAGAGCGACCTGTGCCATCTTTTTTCTTATGTCCAATCCTTCAGGAAATAATGCATGATCCACAAGTTGCAGCAGATGGATTTACCTATGAAGGAGATGCCATACGTGAATGGTTGGAAAATGGACATGATACTTCTCCCATGACTAATTTAAAATTGAGTCACCTGTTTCTTACTCCAAATCACGCACTTCGACTTTCCATCCAAGACTGGCTTTGCAAATCTTGA 2475 0.4162 MELLNPLLPPQPHHAPILHLPFHGVPSSSRSQSQVSFPMEESSGKVHVAVGKSIEKAATLLQWAFTHFRKTEIIIIHVYQPSLTIPTLLGKLPASQASPQVVAAFRRVEREQTMKLLDKYLTICRAAKVQASVIVTETDQVQKGIVDLVIRHNIKKLVIGAVPENCIKVKRNSGKANYTAKNAPSFCEVWFIYKGKHIWTREASETPCSLSSCTQHDISTTESLRCRSFQYGNNELCQSEYLQPNSARTTTSSGIRSCVQGEIIETGVTFSSKSSSCSSLCSPQNFSGVYLDTYLEVMEERINNQLTETKREAEAATDEAFAELLKCKRLEVEAMEAIRKVNLFESAHAHEVKLRKKDEDALRAAVQEQQKLLDESEEIAGELQMTMRNIALLDSHAQEANHRRDEAADELSLIQASISTLWPEWQHIRRQKMEALRWLERWKSHGQVGAAQCGVIGFAEELPELAEFSLSDLQNATCNFSKSFKITQGGYGCIYKGEILGRTVAIKKFHQHNVQGPVEFHQEVQVLGNLQHPHLITLLGVCPEAWSIVYEYLPNGTLQDYLFRKSNNFPLTWNIRARMIAEIASALCFLHSSKPETIIHGDLKPETILLDSSLSCKICEFGFCRLVNEESLLRPSFRLSTEPKGAFTYTDPEFQRTGILTPKSDIYSFGLIILQLLTGRTTVGLAVLVRNAVSCGKLSSILDSSAGEWPSAVATRLAELGLQCCQQSRRDRPELTPTLVRELEQLHASEERPVPSFFLCPILQEIMHDPQVAADGFTYEGDAIREWLENGHDTSPMTNLKLSHLFLTPNHALRLSIQDWLCKS* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2291 824 Pfam Protein tyrosine and serine/threonine kinase 485 736 IPR001245 GO:0004672|GO:0006468
Apr2g2291 824 SUPERFAMILY RING/U-box 749 823 - -
Apr2g2291 824 ProSiteProfiles Protein kinase domain profile. 480 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2291 824 CDD RING-Ubox_WDSUB1_like 758 799 - -
Apr2g2291 824 Pfam U-box domain 754 823 IPR003613 GO:0004842|GO:0016567
Apr2g2291 824 CDD STK_N 45 195 - -
Apr2g2291 824 SMART Ubox_2 757 820 IPR003613 GO:0004842|GO:0016567
Apr2g2291 824 Coils Coil 299 323 - -
Apr2g2291 824 Gene3D Transferase(Phosphotransferase) domain 1 553 754 - -
Apr2g2291 824 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 755 824 IPR013083 -
Apr2g2291 824 PANTHER OS10G0100500 PROTEIN 36 823 - -
Apr2g2291 824 Coils Coil 359 379 - -
Apr2g2291 824 Gene3D HUPs 32 162 IPR014729 -
Apr2g2291 824 SUPERFAMILY Protein kinase-like (PK-like) 464 739 IPR011009 -
Apr2g2291 824 PANTHER OS02G0152300 PROTEIN 36 823 - -
Apr2g2291 824 Gene3D Phosphorylase Kinase; domain 1 457 552 - -
Apr2g2291 824 ProSiteProfiles U-box domain profile. 753 824 IPR003613 GO:0004842|GO:0016567
Apr2g2291 824 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2291 Apr-Chr2 27923453 27927895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2291 45 821 U-box Gene Family AT2G45910 37.578 8.89e-175 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Apr2g2291 PK_Tyr_Ser-Thr 7.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2291 - - gmx:100788846 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2291 2 27923453 27927895 Apr2g2291 2 27923453 27927895 ECH
Apr2g2291 2 27923453 27927895 Apr3g1476 3 29381602 29387145 PCT