Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2284 ATGGAGAGTCGCAATCCATCGGTACGATGGAGCCCTACAAAAGAGCAAATAAGCATTTTAGAGAACTTGTATAAGGAGGGAATAAGGACTCCAAATGCTGACCAAATACAAGAGATAACTTGTAGGCTCAGGGTGTATGGTCACATTGAGGGAAAGAATGTCTTCTACTGGTTTCAGAATCACAAAGCCAGGCAAAGGCAGAAGGAAAAGCAACAAAGCAGTGGAATCAGCTTTTATCCTCAACAACCAAAGGTGCTAACACATGGAAGTATTAACTCAAGAACTGAGAAAGTTGTGCCTTTGGGGATGCCAAAATTTCGTGATGGCTCGCAGATATACAAGCAATTGCACCAGAAAGTATCCGATTACAACTTTAGCATCAGTAAGCCACAAACGTTGACTCTCTTTCCCCTTCATCCAACCGGCATTTTGGAAGGAAGAACAACCGAGCAAGTGCCTTCTCTTGCTTCAAATTCTGCTGATATCACTGATAAAACTTCTGGTTCTTCTGATATTGATGGAGATGGTCGTCCAGGAAACCAATCGTTCATTGATTTTTTCACTTCTGAACAAAGCAGTCGAGGGAGTGATTAA 594 0.4209 MESRNPSVRWSPTKEQISILENLYKEGIRTPNADQIQEITCRLRVYGHIEGKNVFYWFQNHKARQRQKEKQQSSGISFYPQQPKVLTHGSINSRTEKVVPLGMPKFRDGSQIYKQLHQKVSDYNFSISKPQTLTLFPLHPTGILEGRTTEQVPSLASNSADITDKTSGSSDIDGDGRPGNQSFIDFFTSEQSSRGSD* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2284 197 MobiDBLite consensus disorder prediction 148 197 - -
Apr2g2284 197 MobiDBLite consensus disorder prediction 66 92 - -
Apr2g2284 197 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 6 73 IPR044555 GO:0003700|GO:0099402
Apr2g2284 197 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 74 191 IPR044555 GO:0003700|GO:0099402
Apr2g2284 197 SMART HOX_1 5 72 IPR001356 GO:0003677
Apr2g2284 197 MobiDBLite consensus disorder prediction 70 92 - -
Apr2g2284 197 Pfam Homeodomain 8 67 IPR001356 GO:0003677
Apr2g2284 197 Gene3D - 7 74 - -
Apr2g2284 197 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 74 191 - -
Apr2g2284 197 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 6 73 - -
Apr2g2284 197 CDD homeodomain 9 69 IPR001356 GO:0003677
Apr2g2284 197 SUPERFAMILY Homeodomain-like 4 73 IPR009057 -
Apr2g2284 197 ProSiteProfiles 'Homeobox' domain profile. 3 68 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2284 Apr-Chr2 27872985 27874145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2284 7 193 Wox Gene Family AT5G59340 38.057 3.57e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Apr2g2284 Homeodomain 7.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2284 - - ccaj:109805672 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2284 2 27872985 27874145 Apr2g2284 2 27872985 27874145 ECH