Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2274 ATGGGGGCAAGGCTGTTCGTGAGCAGATTATCCTTTTTCACTACAAGGGAGCATCTCAGGACGCTGTTCGCTCCATTCGGACACGTTAAGGAAGCTTTTCTAGTGTTTGACCATAAAACCGGAAGGCCCAAAGGGTTTGGGTTTGTCTCCTACGACTCCCAAATTGAAGCGGAAAAGGCTATCAAAGCCATGAATGGCAGGGTTGTTGATGGAAGGATTATTTTCGTGGAACATTGTACTTCAGCAATCCTTAAATGA 258 0.4574 MGARLFVSRLSFFTTREHLRTLFAPFGHVKEAFLVFDHKTGRPKGFGFVSYDSQIEAEKAIKAMNGRVVDGRIIFVEHCTSAILK* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2274 85 Gene3D - 1 82 IPR012677 -
Apr2g2274 85 PANTHER BNAA02G06700D PROTEIN 3 81 - -
Apr2g2274 85 PANTHER TRANSFORMER-2-RELATED 3 81 - -
Apr2g2274 85 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 3 81 IPR000504 GO:0003723
Apr2g2274 85 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 73 IPR000504 GO:0003723
Apr2g2274 85 SUPERFAMILY RNA-binding domain, RBD 4 81 IPR035979 GO:0003676
Apr2g2274 85 SMART rrm1_1 4 77 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2274 Apr-Chr2 27805384 27807133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2274 7 80 Eukaryotic Initiation Factors Gene Family AT3G11400 41.892 2.16e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2274 - K13195 aprc:113856294 157.147