Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2258 ATGGGACTAAAACACATTTTCTTGTTCAAACCATCCTCACCATTACCACCTTCAATCCCTCCCACCAAAACCTTCTCCGATTCATTAATGGAAGAAGACATTGAAACCGCTCGCTCCCTCATCAACAAATGGGATCCACTTTCCCCTTCAGACCAACTTCAGTGTCCATTCCCTAAAACCCCTCCTCTTTTCAGCAACACACGCCAAGAAGCCAAACAGTACCTTGACGCCGTCAAAACCCTACAGTCCACTATGCAGTGCCTCGTCGCACAGGATTCCTCCTCCGTGAATCTCGTCCAAGCTCAGCTCTTAATGCAACTCGCCATGAAGAGGCTCGAGACAGAGTTCCATCGCATATTAGCCGAAAACAGAGACAATTTGAATCCTGAATCCGTCTCCGCCCGCTCCTCCACCGATCTAAGGAGCAGCGTCTCCGATTACGACGACGATTTTTCCGAGGACGACTTCCGCTTCGCCGCCGCCGATTCAATATCAGCGGTTGCCATGGCGAGTTTGAAAGCCATAGCGGAGTGCATGATTTCCGCTGGCTATAGCAAAGAGTGCGTCAAGATTTACGTCGCAACGAGAAAGTCGATTGTGGATGAGGCACTGAACCATCTCGGAGTAGAGAAGCTTAGCTTCTCTCAGGTTCAGAAGATGGACTGGGAAGTACTCGAGCTGAGGATCAAGCACTGGCTGAATGCCGTCAAGGTCGCCGTCGGTACTCTCTTTCACGGCGAGAGAACTCTCTGCGAATACGTCTTCAGTTCTCCGGAGAGGAAGATCGTGGAGTCCTGTTTCTCCGATATTTGCAGAGAAGGCACAACGTCGCTGTTTGGATTCCCGGAAAACGTGGCAAAGTGCAAGAAAACGCCAGAGAAAATGTTCAGGACGCTCGACTTGTACGAAGCGATCTCTAACAACTGGCAACAGATTGAGTCAATCTTCTCGTTCGAATCGACGTCTTCGATCAGATCGCATGCAATTGCTTCTCAGGTGAGGCTCGGGGAGGCCGTTCGTACGATGCTACTGGACTTCGAAACGGCGATTCAGAAGGAATCCTCGAAGACGCCGGTGCCAGGAGGCGGGATCCACCCGCTCACGCGCTACGTAATGAACTACATCGCGTTTCTCGCCGATTACAGCGACGCGCTCGCGGATATAGTAGCCGATTGGCCGCAACATCCGATGCCGGAGTCTTACTACCGCAGTGCAAATCACGAGGAGAATAATCCGTCGTCGGAGTTAGCAGAACGGATCGCGTGGTTGATACTGGTGCTTCTCTGCAAGCTTGACAGCAAAGCGGAGCTGTACAACGACGTTGCGCTCTCTTACCTGTTTCTCGCGAATAACATGCAATACGTCGTCATAAAAGTGCGCAAATCGAACCTAGGGTTCATTCTCGGTGAGGATTGGTTGACGAAGCACGAGTCGAAGGTCAAAGGGTACGTCACCAAATACGAGCGTGTGGGATGGAGCAAGGTGTTGCCGTTATTGCCGGAAAATCCAACGGCGGAGATGCCGGCAGAGCAAGCTAGGGCCATCTTCCAGATTTTCAACGTTGCATTTCGTGACGCGTGCAGGACACAGTTCTCGTGGGTTGTATCCGACCCGAAACTGCGAGACGAAATTAAAATGTCGATAGCTTCGAAGCTGGAGGCGAAGTATCGAGAGTTCTACGAAAAGAAGCGGGTCGGGTCGGAATCGGTTATTGAGTTCGAACCGTATGATTTGGGGAATTATCTTTGCGACATTTTGTGTGGGACGGGTCAATGTCAATCAGGTAGCGTTTCGTCGCATTCTCTCTCGCCCCCACATAGCTTCAAACGCCCGTGA 1836 0.5131 MGLKHIFLFKPSSPLPPSIPPTKTFSDSLMEEDIETARSLINKWDPLSPSDQLQCPFPKTPPLFSNTRQEAKQYLDAVKTLQSTMQCLVAQDSSSVNLVQAQLLMQLAMKRLETEFHRILAENRDNLNPESVSARSSTDLRSSVSDYDDDFSEDDFRFAAADSISAVAMASLKAIAECMISAGYSKECVKIYVATRKSIVDEALNHLGVEKLSFSQVQKMDWEVLELRIKHWLNAVKVAVGTLFHGERTLCEYVFSSPERKIVESCFSDICREGTTSLFGFPENVAKCKKTPEKMFRTLDLYEAISNNWQQIESIFSFESTSSIRSHAIASQVRLGEAVRTMLLDFETAIQKESSKTPVPGGGIHPLTRYVMNYIAFLADYSDALADIVADWPQHPMPESYYRSANHEENNPSSELAERIAWLILVLLCKLDSKAELYNDVALSYLFLANNMQYVVIKVRKSNLGFILGEDWLTKHESKVKGYVTKYERVGWSKVLPLLPENPTAEMPAEQARAIFQIFNVAFRDACRTQFSWVVSDPKLRDEIKMSIASKLEAKYREFYEKKRVGSESVIEFEPYDLGNYLCDILCGTGQCQSGSVSSHSLSPPHSFKRP* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2258 611 Pfam Exo70 exocyst complex subunit 230 582 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr2g2258 611 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 2 592 - -
Apr2g2258 611 Gene3D Exocyst complex component Exo70 59 593 - -
Apr2g2258 611 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 592 IPR004140 GO:0000145|GO:0006887
Apr2g2258 611 SUPERFAMILY Cullin repeat-like 64 584 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2258 Apr-Chr2 27697685 27699604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2258 1 589 EXO70 exocyst subunit family AT5G59730 50.081 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2258 K07195 - gmx:100801773 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2258 2 27697685 27699604 Apr2g2258 2 27697685 27699604 ECH