Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2254 ATGATTGATTGGAGTAAATTTAGCTTCTTTATCTGTGCTTTATCTATCTTGCCCTTGGTATGCTTCTGTGCCACCTTTGTTCCGGTAGATAATTATCTTATAGATTGTGGAGCACCTGCAAATACTTCTGTAGATGGCCGCAATTTCATAGCTGATAGTTTATCTAAGGATCTTCTTTCCACACAACAAAATATTCTTGCCACTTCCTCCTTAAAATCAAATGCCTCTTCCTCTGATGATTCACCTCTCTATCAAACTGCAAGAATCTTCACTGGATCATCAAAGTACACTTTTCCTATTCAGCAAAAGGGGAGACACTGGATCCGTCTCTATTTCTTTCCATTCACTTATCAAAAATACAATTTGAGTGCTGCAAATTTCTCTGTTGCAACCCAAAACTATGTGCTTTTTAGTAGCATCAACATGCAGAAAAATCCTGTTATGAAGGAATACTCGGTTAATGTGACCTCAGACACTCTTGTTATCACCTTTACCCCTTCTGATAATTCCACTGCTTTTGTGAATGCCATTGAAGTTGTTTCTGTTCCTGATGATCTCATTGTTGATGATGCTTCTGCGTTAGATCCATCAGCAACCTACTCTGGGTTGGTAACACAGGCACTGGAGACAGTTTGGAGGGTTAACATGGGTGGTCCAAATCTGTCCCCTTTAAATGACTCCCTCCAAAGAACTTGGGTTCCTGATCAAGGTTTCCTTTTGCAACCTAACCTTGCCTCATCTGTTTCAAATATCGATGCTGTTAATTATGAGCCAGGCGGGCCAACGAAAGACACTGCTCCAGCTACTGTTTATGGTACTCTTACACAGATGAACTCGAGCGGTGATCCCCGTAATATTTTCAATTTGACATGGCAGTTTGATGTGGAACCCGGATTTCAGTACCTTGTTCGACTTCACTTCTGTGATGTAGTCAGTAAAGCTCTCAATGAACTCTACTTCAATGTTTATGTTAACTCCTTGTTTGCTGTCCAGAATCTTGATCTCAGTATTATAAGTAATAATAATTTGGGTGCTCCATATTATAAGGATTTGGTTACAGCCTTAGCTGTCAGCAATAAACTTCGCGTAAGTGTTGGCCCTACTAATTTAAATAAGGGCTATCCTAATGCCATTTTGAATGGGCTTGAGATCATGAAAATGAACAATTCTATGGGCAGTCTTAGCTCAGCAGGAGCTCCTGTGGCTATTACCTCGGGTTCAAGTTCTAAGAAAGTTGGCGTGATTGTGGGTGTGACTATTGGGGCATTTAGTGCAGTGATCTTGGCTGGAGTTTTCTTTGTACTATGCAGGAAGAGAAGACGGTTGATACGACAAAAGCAGTCAAAGACATGGGTTCCTTTGTCCGTCAACGACGGAACTACTACCCATACCATGGGAAGTAAATATTCTAATGGCACAACAATAAGTGCTGCTTCAAACTTCGAGTACCGAGTCCCTTTTGTGGCAGTTCAGGAGGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGGATAGGTGGTTTTGGGAAAGTGTACAAGGGAGAATTAAGTGATGGCACAAAAGTGGCAGTTAAGAGGGGAAATCCACGGTCCCAGCAGGGGCTAGCAGAATTCCAAACTGAAATTGAAATGCTATCTCAGTTCCGTCATCGTCATTTGGTGTCTTTGATTGGGTACTGTGATGAAAAGAATGAAATGATCTTGATCTATGAATATATGGAGAAAGGAACTCTCAAGAGTCATCTATATGGTTCAGGTCTCCCAAGCTTAAGTTGGAAAGAGAGGCTTGAGATATGCATTGGATCTGCTAGAGGACTTCATTACCTTCACACTGGCTATGCTAAAGCAGTTATTCACCGTGATGTCAAATCTGCCAATATCCTACTTGATGAGAACCTAATGGCTAAAGTTGCTGATTTTGGATTATCAAAGAAGGGGCCTGAAATTGACCAGACACATGTGAGCACGGCTGTCAAAGGGAGTTTTGGGTACCTTGATCCTGAGTATTTCAGGAGGCAACAACTAACAGAAAAGTCAGATGTGTATTCATTTGGGGTAGTTCTGTTTGAAGTTCTTTGCGCAAGACCTGTCATTGATCCATCCCTTCCTAGAGAAATGGTAAACTTGGCTGAATGGGCAATGAAATGGCAGAAGAAAGGACTGTTGGAGCAAATCATAGATCCAACACTTGCTGGCAAAATCAGACCAGATTCTCTTAGGAAATTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTATGGTGTTGACAGGCCTTCTATGGGAGATGTCTTATGGAATTTGGAGTATGCTCTCCAACTTCAAGAGGCTGTGGTTCAAGGTGATCCTGAAGATAACAGCACCAATATGATTGGTGAACTCTCTCCACAGGTCAACAATTTCAACCATGATGCAAGTGTTTCTGCTGTACAGTTTGAAGGTTCAAATGTGGATGATCTATCTGGTGTTTCTATGAGTAGGGTGTTCTCACAGTTGGTGAAGTCTGAGGGTAGATAG 2514 0.4157 MIDWSKFSFFICALSILPLVCFCATFVPVDNYLIDCGAPANTSVDGRNFIADSLSKDLLSTQQNILATSSLKSNASSSDDSPLYQTARIFTGSSKYTFPIQQKGRHWIRLYFFPFTYQKYNLSAANFSVATQNYVLFSSINMQKNPVMKEYSVNVTSDTLVITFTPSDNSTAFVNAIEVVSVPDDLIVDDASALDPSATYSGLVTQALETVWRVNMGGPNLSPLNDSLQRTWVPDQGFLLQPNLASSVSNIDAVNYEPGGPTKDTAPATVYGTLTQMNSSGDPRNIFNLTWQFDVEPGFQYLVRLHFCDVVSKALNELYFNVYVNSLFAVQNLDLSIISNNNLGAPYYKDLVTALAVSNKLRVSVGPTNLNKGYPNAILNGLEIMKMNNSMGSLSSAGAPVAITSGSSSKKVGVIVGVTIGAFSAVILAGVFFVLCRKRRRLIRQKQSKTWVPLSVNDGTTTHTMGSKYSNGTTISAASNFEYRVPFVAVQEATNNFDESWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKKGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGLLEQIIDPTLAGKIRPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVQGDPEDNSTNMIGELSPQVNNFNHDASVSAVQFEGSNVDDLSGVSMSRVFSQLVKSEGR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2254 837 Gene3D Phosphorylase Kinase; domain 1 458 572 - -
Apr2g2254 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Apr2g2254 837 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 19 829 - -
Apr2g2254 837 PANTHER OS07G0166700 PROTEIN 19 829 IPR045272 GO:0004714|GO:0006468
Apr2g2254 837 SMART serkin_6 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2254 837 Pfam Malectin-like domain 34 387 IPR024788 -
Apr2g2254 837 Gene3D Transferase(Phosphotransferase) domain 1 573 790 - -
Apr2g2254 837 SUPERFAMILY Protein kinase-like (PK-like) 473 768 IPR011009 -
Apr2g2254 837 Gene3D - 206 389 - -
Apr2g2254 837 Gene3D - 31 183 - -
Apr2g2254 837 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2254 837 CDD STKc_IRAK 503 768 - -
Apr2g2254 837 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Apr2g2254 837 Pfam Protein tyrosine and serine/threonine kinase 502 695 IPR001245 GO:0004672|GO:0006468
Apr2g2254 837 PIRSF SRK 359 812 IPR024171 GO:0004674
Apr2g2254 837 PIRSF SRK 39 177 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2254 Apr-Chr2 27654130 27657850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2254 6 837 Receptor kinase-like Gene Family AT3G46290 65.793 0.0 1112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr2g2254 Malectin_like 4.7e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2254 - - gmx:100305416 1389.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2254 2 27654130 27657850 Apr2g2254 2 27654130 27657850 ECH
Apr2g2254 2 27654130 27657850 Apr3g1425 3 28839139 28842752 ECH
Apr2g2254 2 27654130 27657850 Apr3g1425 3 28839139 28842752 PCT