Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2234 ATGATTTACGAGAAAATGGAGCAGTTCATAGATAACTTGCCGCCGATGGATCTGATGCGATCCGAGAAGATGACCTTCGTTCAGCTCATCATTCCCGCTGAGTCTGCGCACCGAGCCATCTCCTATTTAGGCGAACTCGGTCTTCTTCAATTTCGAGACTTAAATGCTGATAAAAGCCCCTTCCAGAGAACATTTGTTAATCAGCAGGTAAAGCGCTGTGCAGAAATGTCAAGAAAACTACGATTCTTTAAGGATCAAATCAATAAAGCTGGCCTAATGTCATCTTCTCGTACCGTATTGCAACCAGATATTGACTTGGAGGATTTAGAGATTCAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAATAGTGACAAACTTCGGCAATCATATAATGAACTCTTGGAATTCAAGATTGTATTACAGAAGGCATGTGGTTTTCTTGTTTCAAGTTATAGACATGCTGTTTCAGATGAGAGAGAACTGCAAGAAAATGTATACTCAAATGATGACTATGTTGAGGCAGCAGCTTTGCTTGAACAGGAAGTTAGGCCTCAACCATCGAATTCATCTGGTTTAAGATTTATCTGTGGGATAATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCAGCTGATGAACAAATCATGGATCCTGTTTCAACTGAGATGATTGAAAAAACAGTGTTTGTTGTCTTTTTCTCTGGGGAACAAGCAAGAACAAAGATTCTGAAAATTTGTGAAGCATTTGGTGCAAGTTGTTATCCTGTTCCTGAAGATATTAGTAAGCAGAGGCAAATAACTAGAGAGGTTTCATCACGTCTTACTGACTTAGAGGCAACTTTGGAAGCTGGGATTAGGCACCGGAACAAGGCTCTCACTTCTATTGCAGACCATCTGGCAAAATGGATAAACTTGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTATGTTTGCAAAAACACAGATGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCACAAGTTGGCATAATCTTCCATCCAATGGATGCAGTGGAATCACCACCTACATATTTTAGGACCAACACTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACGACTATTATATTCCCTTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGTCTCTTGATAGGGGCTTTGGTTCTCATAGCACGTGAAAACAAGCTCAGCTCACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTACGTGCTTCTTTTAATGGCACTATTTTCAATCTATTGCGGATTAATCTACAATGAATTCTTTTCTGTTCCTTTTCACATATTTGGTGCATCAGCTTACAAATGCCGGGATACTTCATGCAGGGATGCGCGTACTATTGGCTTAGTCAAATACCAAGATCCTTACCCATTCGGTGTGGATCCCAGCTGGCGTGGAAGTCGCTCAGAATTGCCTTTTTTGAACTCTATGAAGATGAAGATGTCCATTCTGTTTGGCGTTGCACATATGAACTTAGGAATTATATTAAGTTATTTTAATGCTCGTTTCTTTGGAAACTCACTGGATATGAGGTATCAGTTTGTACCACAGATGATTTTCCTTAACTGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACTGGCTCTCAAGCAGACCTTTATCATGTAATGATATACATGTTTTTGAGCCCCACAGACAATCTTGGTGAGAATCAGTTGTTTTGGGGGCAAAGACCACTTCAGATTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATACTGAGAGATTTCAAGGTCGTAGTTATGGTATACTGAATACCTCTGAGGTGGATCTTGAAGCTGAGCCTGATTCTGCCAGGCAATATCATCATGAAGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATCCACTCCATTGAATTTGTTCTAGGTTCAGTTTCTAATACGGCATCATATCTTCGTCTTTGGGCATTAAGTTTGGCGCACTCGGAACTTTCTACTGTTTTCTACGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTGGTGGGGCTAACTGTTTTTGCTTTTGCAACTGCCTTTATACTGCTAATGATGGAGAGTCTTAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAGTTCTACCATGGTGATGGCTACAAGTTCAGGCCTTTTTCATTTGCCTCCTTATCAGAGGATGACGATTAA 2481 0.4047 MIYEKMEQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQQVKRCAEMSRKLRFFKDQINKAGLMSSSRTVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSYRHAVSDERELQENVYSNDDYVEAAALLEQEVRPQPSNSSGLRFICGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGASCYPVPEDISKQRQITREVSSRLTDLEATLEAGIRHRNKALTSIADHLAKWINLVRREKAVYDTLNMLNFDVTKKCLVGEGWCPMFAKTQMQEALQRATFDSNSQVGIIFHPMDAVESPPTYFRTNTFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLIGALVLIARENKLSSQKLGSFMEMLFGGRYVLLLMALFSIYCGLIYNEFFSVPFHIFGASAYKCRDTSCRDARTIGLVKYQDPYPFGVDPSWRGSRSELPFLNSMKMKMSILFGVAHMNLGIILSYFNARFFGNSLDMRYQFVPQMIFLNCLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRSYGILNTSEVDLEAEPDSARQYHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLSEDDD* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2234 826 PIRSF ATP6V0A1 14 826 IPR026028 GO:0000220|GO:0046961
Apr2g2234 826 Coils Coil 106 133 - -
Apr2g2234 826 Pfam V-type ATPase 116kDa subunit family 42 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Apr2g2234 826 PANTHER VACUOLAR PROTON ATPASES 10 826 IPR002490 GO:0033179|GO:0046961|GO:1902600
Apr2g2234 826 PANTHER VACUOLAR PROTON ATPASE A1 10 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2234 Apr-Chr2 27441094 27452649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2234 6 819 Primary Pumps ATPases(2) AT2G28520 80.147 0.0 1363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2234 K02154 - gmx:100776037 1550.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2234 2 27441094 27452649 Apr2g2234 2 27441094 27452649 ECH
Apr2g2234 2 27441094 27452649 Apr3g1407 3 28513539 28525507 PCT