Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2223 ATGTCCGTAATCGATATTCTCGTTCGTGTCGACGAAATTTGCCAGAAATATGACAAATACGACATCGATAAGCAACGCGAGCTCAATGCCTATGGCGATGACGTTTTCGCTCGCCTCTATGCAGCAGTTGAATCCAACATTCAAGCCGCTCTCAAAAAATCCGAGGCTGCTTCCACGGAGAACAACAGGGCAGTTGTTGCGGCTTTGAATGCAGAGGTTCGTCGAACCAAAGGTAGACTCATGGACGAAGTTCCTAAACTGCGCAAATTGGCACACAAGAAGGTTAAAGGTGTCACAAAAGAGGACATGGCCGTTCGTGAGGATCTTGTTCTTGCATTGCCAGAGAGAATCCAAGCAATACCAGATGGTAGTTTCGGTGCTGCTAGTGAAACTGGAGGATGGGCAGCTTCCTCGTCTTCTAAGAATATCAAGTTTGACTCATCAGGGGAACGACTTGACAGTGAATATTTCCATCAAAGTGAAGAATCCAATCAGTTCCGAAATGAGTATGAAATGCGCAAGATGAAACAGGATGAAGGGCTTGATATTATATCAGAGGGATTGGATACCTTGAAGAATCTGGCCCATGATATGAATGAGGAAATGGATAGGCAAGTTCCTTTAATGGATGAAATTGAGACAAAGGTGGATAGAGCAACAGCTGATGTGAAAAACACCAACGTAAGGCTGAAGAAAACTCTCACACAGATGAGGTCTAGTAGAAATTTCTGCATTGACATCATTCTGCTGTGTGTTATTCTGGGAATCGCTCTCTATATATACAAGTAA 789 0.436 MSVIDILVRVDEICQKYDKYDIDKQRELNAYGDDVFARLYAAVESNIQAALKKSEAASTENNRAVVAALNAEVRRTKGRLMDEVPKLRKLAHKKVKGVTKEDMAVREDLVLALPERIQAIPDGSFGAASETGGWAASSSSKNIKFDSSGERLDSEYFHQSEESNQFRNEYEMRKMKQDEGLDIISEGLDTLKNLAHDMNEEMDRQVPLMDEIETKVDRATADVKNTNVRLKKTLTQMRSSRNFCIDIILLCVILGIALYIYK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2223 262 SUPERFAMILY SNARE fusion complex 164 232 - -
Apr2g2223 262 PANTHER SYNTAXIN-72 1 261 - -
Apr2g2223 262 Gene3D - 170 232 - -
Apr2g2223 262 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Apr2g2223 262 Pfam SNARE domain 208 258 IPR000727 -
Apr2g2223 262 Coils Coil 209 229 - -
Apr2g2223 262 PANTHER SYNTAXIN 1 261 IPR045242 -
Apr2g2223 262 CDD SNARE_Qc 176 232 - -
Apr2g2223 262 SMART tSNARE_6 166 233 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2223 Apr-Chr2 27338372 27340273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2223 1 261 SNARE and Associated Proteins AT3G09740 66.540 3.78e-133 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2223 K08506 - gmx:100777251 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2223 2 27338372 27340273 Apr2g2223 2 27338372 27340273 ECH