Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2222 ATGGAGGGAGTTCAACATGGCTCTAATTACTCTTTTCCACCTGGTTTCAGGTTCCATCCATCGGATGAGGAGCTCATAGTTCATTACTTGCAAAACAAAATCACCTCACGTCCACTTCCAGCATCCATTATAGCTGAAATAGATCTGTATAAGTATAATCCATGGGAGTTACCTAATAAGTCGTTGTTTGGGGAGGAAGAATGGTATTTCTTTAGCCCAAGAGACAGAAAGTACCCAAATGGATTGAGGCCAAACAGAGCCGCAGCTTCTGGATACTGGAAGGCAACTGGAACTGACAAGCCAATTATTTCTTCTTGTGGGTCAAAGCGCATTGGGGTGAAGAAAGCTTTGGTGTTTTATTCAGGTCGACCTCCTAAGGGAGCTAAGACGGATTGGATCATGAATGAATATAGATTGGTTGACACAGCCACCAAATCCTCCAAGATAAAAGGTTCCATGCGGTTGGATGACTGGGTACTATGCCGGGTTCGACATAAAGGCTACACATCGAAGATTTTATATGAAAATCAAGAGAATCTTAGCGAACTAAACTTGCCAGAAAAACTAACGAGGAATGAAGAATACGCAACAAACACAAACTTTCCCTCTGACATGATCACTGATTATCAGTACAAAGACTATCAGATCATAGCCTCTATTCTTGTTGGTGGACCTATAGCTCCCACTGAAAACATGTCAAATCTGAGCTTCAACGGGTGCAAAAGCAACAATCTAGATTCAGTTTATGAAGATGGTTTCAACAAAGTGAATTCTCAAGCCACAACTCCTTCTTTGGACACTTACTTCAACTCACTGACTAGAAAATCTAACGAAGATGATCCGTATGAAAATCTCATTTCTTTTAACAGGAAGTTCAACACTGAGATCAAAATAGACGAATCGCCTGAGAAAGTGTTGACCACTAGAGAATTGAACTGCTATAACCGAAATCAGTCTCAAGATCACATTTTCAATGGGAACCCACAAGATCCTAGTATCAATTTTCAAGAGCTAAACGAATTAGCCTTCACTGGCAGGTACCCACAGTGA 1050 0.4095 MEGVQHGSNYSFPPGFRFHPSDEELIVHYLQNKITSRPLPASIIAEIDLYKYNPWELPNKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPIISSCGSKRIGVKKALVFYSGRPPKGAKTDWIMNEYRLVDTATKSSKIKGSMRLDDWVLCRVRHKGYTSKILYENQENLSELNLPEKLTRNEEYATNTNFPSDMITDYQYKDYQIIASILVGGPIAPTENMSNLSFNGCKSNNLDSVYEDGFNKVNSQATTPSLDTYFNSLTRKSNEDDPYENLISFNRKFNTEIKIDESPEKVLTTRELNCYNRNQSQDHIFNGNPQDPSINFQELNELAFTGRYPQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2222 349 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Apr2g2222 349 PANTHER NAC TRANSCRIPTION FACTOR 56 1 318 - -
Apr2g2222 349 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Apr2g2222 349 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 318 - -
Apr2g2222 349 SUPERFAMILY NAC domain 10 166 IPR036093 GO:0003677|GO:0006355
Apr2g2222 349 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2222 Apr-Chr2 27333370 27335125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2222 8 236 NAC Transcription Factor Family AT1G69490 54.978 1.93e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr2g2222 NAM 4.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2222 - - gmx:100817193 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2222 2 27333370 27335125 Apr2g2222 2 27333370 27335125 ECH