Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2214 ATGGGAGAATATAGGAGTTTTTCATTTTCCAAGATGATTGGCTGCTGGGGTTGCTTCGGCTTCATTAAAAAAACAAAACGACGAGGGGCTAAACGTGATGAGACCTCGTATAGTGAGGGTACAAGTAACACCGCCAGTGGAGATGAAAATGAGATGCTAACTCAACACAACCGTTCCAAGGAAATCTTGAACTTTAGAGCAGAAAATGGCATGATTTGTAGGCCGTTTCCTGTCAAGGAAACTTACAAACTTGTTCGCTCAGAGGATGAAAATGGGAACAAGATGATAAATGAGTACATTCGAGAGTATAAAATTGGTTCTGGAAGCTATGGCAAAGTGGCTCTTTATCGAAGTTCTGTCGATGAAAAGCATTATGCAATTAAGGCCTTTCATAAGTCTCATTTACAGAAGCTTCGAGTTGCACCTTCTGAGACTGCCATGACTGATGTTCTACGTGAGGTACTTATAATGAAAATGCTGGAACATCCTAATATAGTCAATCTAATTGAGGTGATTGATGACCCAGAGTCGGATGACTTCTACATGGTACTTGAATATGTGGAAGGCAAATGGGTTTGTGAGGGTTCAGGTCGTCCTTGTGCATTAGGTGAAGAGACTGCTAGGAAATACTTGCGTGATATAGTCTCGGGATTAACCTATCTTCATGCTCATAATATAGTGCATGGAGATATAAAACCTGACAATCTGTTGATTACTCGTCATGGCACAGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCCTTTGAGGATGGTAATGATGAACTTCGTCGATCACCTGGAACCCCTGTTTTCACTGCACCAGAGTGTTGTTTAGGCCTTACTTATCATGGTAAAGCTTCAGACACGTGGGCGGTAGGAGTTACTTTGTACTGTATGATATTGGGTGAATACCCATTTCTCGGTGACACACTTCAAGACACTTATGACAAAATAGTGAATGATCCTTTAGTTCTTCCAGATGACATTAACCCCCAGTTGAAGAACTTGATAGAAGGATTACTTTGCAAAGAGCCAGAACTACGGATGACATTGGGCGATGTTGCTGAGCATAAATGGATTATTGGAAATGATGGGCTAATTCCTGATTACTTGTGTTGGTGCAAACGCAAGAGCCTGGAGAGGGAAGATTTTGATGGGAGCAATAATGCTTGCTTGACCCATACTAAATGA 1191 0.4165 MGEYRSFSFSKMIGCWGCFGFIKKTKRRGAKRDETSYSEGTSNTASGDENEMLTQHNRSKEILNFRAENGMICRPFPVKETYKLVRSEDENGNKMINEYIREYKIGSGSYGKVALYRSSVDEKHYAIKAFHKSHLQKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDDFYMVLEYVEGKWVCEGSGRPCALGEETARKYLRDIVSGLTYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDGNDELRRSPGTPVFTAPECCLGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPDDINPQLKNLIEGLLCKEPELRMTLGDVAEHKWIIGNDGLIPDYLCWCKRKSLEREDFDGSNNACLTHTK* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2214 396 SUPERFAMILY Protein kinase-like (PK-like) 95 366 IPR011009 -
Apr2g2214 396 MobiDBLite consensus disorder prediction 30 53 - -
Apr2g2214 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Apr2g2214 396 Gene3D Transferase(Phosphotransferase) domain 1 198 365 - -
Apr2g2214 396 MobiDBLite consensus disorder prediction 36 53 - -
Apr2g2214 396 SMART serkin_6 99 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2214 396 Pfam Protein kinase domain 101 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2214 396 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 34 388 - -
Apr2g2214 396 CDD STKc_LKB1_CaMKK 105 360 - -
Apr2g2214 396 Gene3D Phosphorylase Kinase; domain 1 93 196 - -
Apr2g2214 396 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Apr2g2214 396 ProSiteProfiles Protein kinase domain profile. 99 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2214 396 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 34 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2214 Apr-Chr2 27283033 27288313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2214 105 360 CBL-interacting serine-threonine protein kinases AT5G35410 33.203 9.68e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Apr2g2214 Pkinase 3.6e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2214 K00908 - gmx:100776013 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2214 2 27283033 27288313 Apr2g2214 2 27283033 27288313 ECH