Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2207 ATGCATGTTGACAATGCGATTGCTATGGGGTCTAAGGCTGCCCCTACTCATTCTGATTCAACTTTTATATCCCAACAAATCAACCTACAAATTATACGTTTTAAGGAACTGGAGAAAAAAATGAGTGAATTTGCCATGATCTTTGTGCGTAATTCATTGAAGTTCAAGTGTTACTGGCTTGCTGAGGCTTTGTTCACTTTCAAGGGTTCGCTTAGAGGTCCACAGCAATTCGGATGCAGCATTGTGAAATATCCATGTCAAATGCAATGGCCTTGTCTTGACTGCTATAAACTAAAAGATCCAGGTGGAATGACAGCAAAGATAGAAGGGAATAATGACATTCCAACTCTCACACCCCTTCAAGAAGTTCAAGTTAAAAAACCAGGAGGAAGAAGGACTGCTTCCATAGTTGGTAGTGTTGTTGCTGCCTCAATCATCATTGTCATTGTAGTCATTGTCTATATCTGCTTGATGCGTGTTAAAAGATTTATGAGGCAAGCATCTGAGACTGCTTCTTCTATGCCTTCTCCCACTTTTGAGATGGGAAGAGTCAACAACTCGCAGTATGTTAATGCTTTCTCTTCACATTATACGCAGAACACAAGGCAGTTAACAATTTTGGAGCTAGAACAAGCTACACAAAACTTCAGTCATAATAATATTATAGGTGAAGGTGGATTTGGTTTTGTATACAAAGGCTTGCTTCAAGATGGATCTATTGTGGCTATAAAAAGGCGTCTATTTACTGTGACACGGGATTTCATCCGCGAGGTGAATCAGATAGGTCACATTCACCACATTCATCTTGTCAAGCTTATTGGCTATTATGAAGATAGCTATCAACAATTACTTGTTTATGAATATCTCCCTAATGGTAACGTGGGGAATCATCTATATGACAATGAAGGTTTGCCTATTGGAAGATTAGATTTGTGGAGAAGGTTATCTATTGCTTTAGGTGCATCCAAAGGAGTGGAACATCTTCACAGTTTGGTCCCTCCTTTGGTTCACACAAATTTTAGAACTAGCAATGTTCTGTTAGATGAAAATTATACAGCCAAGGTTTCTGATTATGGATTCTCCAAATTTCAATCAAAAGTTGATCAAGCTGGTTCATCTTCAAATATAGACTGCTTCCTTGACCCAGAGTTGAACTTATCACAAAACTATTCGGAGGAAAGTGATGTATACAGTTTTGGGGTCTTCTTACTAGAGTTGATTAGTGGCTGTGAAGCACATAACAGAAACATGTCACACCCACGTGAAAATCTTGTATTTCAGGCAAAAAATAGCATTGAGTTGGACAACTTTGTTGACGTAACGCTGGGAGACCAAGAAAAGCATGTTGCTACACGAATGATAAAGTTGGCGTTGCTGTGTTTGGATGTGACTTCTCGAAGACCATCAATGGCACAAATTGTGCATGAGTTAGAGCGGATTCAAAGAGAAATTGTTCCTCAATTCAACGAGGAGATTGGTGCAGTGACCCTTGGGAGTGAACTCTTTCAATAA 1512 0.3929 MHVDNAIAMGSKAAPTHSDSTFISQQINLQIIRFKELEKKMSEFAMIFVRNSLKFKCYWLAEALFTFKGSLRGPQQFGCSIVKYPCQMQWPCLDCYKLKDPGGMTAKIEGNNDIPTLTPLQEVQVKKPGGRRTASIVGSVVAASIIIVIVVIVYICLMRVKRFMRQASETASSMPSPTFEMGRVNNSQYVNAFSSHYTQNTRQLTILELEQATQNFSHNNIIGEGGFGFVYKGLLQDGSIVAIKRRLFTVTRDFIREVNQIGHIHHIHLVKLIGYYEDSYQQLLVYEYLPNGNVGNHLYDNEGLPIGRLDLWRRLSIALGASKGVEHLHSLVPPLVHTNFRTSNVLLDENYTAKVSDYGFSKFQSKVDQAGSSSNIDCFLDPELNLSQNYSEESDVYSFGVFLLELISGCEAHNRNMSHPRENLVFQAKNSIELDNFVDVTLGDQEKHVATRMIKLALLCLDVTSRRPSMAQIVHELERIQREIVPQFNEEIGAVTLGSELFQ* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2207 503 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 104 501 - -
Apr2g2207 503 Pfam Protein tyrosine and serine/threonine kinase 219 477 IPR001245 GO:0004672|GO:0006468
Apr2g2207 503 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 104 501 - -
Apr2g2207 503 SUPERFAMILY Protein kinase-like (PK-like) 196 485 IPR011009 -
Apr2g2207 503 ProSitePatterns Protein kinases ATP-binding region signature. 222 244 IPR017441 GO:0005524
Apr2g2207 503 Gene3D Phosphorylase Kinase; domain 1 179 288 - -
Apr2g2207 503 Gene3D Transferase(Phosphotransferase) domain 1 289 493 - -
Apr2g2207 503 ProSiteProfiles Protein kinase domain profile. 216 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2207 Apr-Chr2 27232580 27235500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2207 136 480 Receptor kinase-like Gene Family AT1G79620 34.358 2.89e-53 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Apr2g2207 PK_Tyr_Ser-Thr 2.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2207 - - aprc:113855951 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2207 2 27232580 27235500 Apr2g2207 2 27232580 27235500 ECH