Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2192 ATGGGTTTTGGTCATTCAAGATCTGAAAGGTTTGAAGATGATCCTGAACAAGCAAAAGTTCCTTCAAACAAGGGTGACAATGGGATTAAGATTAAATACCACATTGATGGAACACAAATACCCAAGTCTAGTTCCAAAATGGCTCAAAAGAAGGTGACAAGGAAGAAGTTCTTGCAAGCTAGAGTGTTGTCAAGAGTATTCTCAGAGGACTACGAACGAGTAAAGAGAAAAGTATTGGATCCTAGGGGACAAACCATTCAGCGCTGGAACAAGATTTTCTTGGTAGCATGTATAGTATCTTTGTTTGTGGACCCTTTGTTCTTTTATTTGCCAATGGTTAGAGATGAAGCATGCATTGATGTTGAAATAACTCATGAAGTGATCCTCACATTGGTGAGATCGGTGGGGGATTGCTTTTACTTGATTCAGATTTTGATGAAGTTTCGCACAGCTTATGTTGCTCCTTCTTCCCGGGTTTTTGGTAGGGGTGAACTTGTTGTAGGCTATTCTAAGATTGCATTTAGGTACCTCCGAAAGGGTTTTTGGTTAGATTTTGTTGCTGCCTTGCCCCTTCCTCAGGTGTTAATTTGGATTGTTATCCCAACTCTTAAGGGCTCAACCATGGCAAACACAAAAAATGTCCTTCGCTTTTTCATCATTTTCCAATATTTGCCGAGGCTATTTCTGATTTTTCCACTTTCATCACAAATTGTGAAAGCTACAGGGGTTGTGACACAAACAGCATGGGCAGGGGCTGCTTACAACCTGATGCTTTACATGCTGGCAAGCCATAAAAAGATTTTAGGAGCTTGCTGGTACCTTCTATCAATTGAACGTCAAGAAGCATGCTGGAGAAGTGTGTGCAATCTAGAGAAGTCATTTTGTGAATATGGATTCTTTGACTGCCACAGGGTTAAAGATGCCCTAAGGATCTCTTGGTTTGTAGCAAGTAATATCTCGAATTTATGCTCACCAAATGATAACTTTTATCAGTTTGGTATATACGCTGATGCCGTGACTTCCCAAGTTACATCCTCTGCATTCTTTAATAAATACTTTTTCTGTCTGTGGTGGGGCCTAAGAAATCTGAGCTCTTTGGGACAAGGCCTTCTTACTAGTACTTTTGTTGGAGAAATCATGGTGGCCATTGTTGTTGCAACCCTTGGATTAGTTCTTTTTGCGTTGCTAATCGGTAATATGCAGACATACCTGCAATCAACTACTGTTCGCTTAGAAGAGTGGAGGGTGAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCCAGAATTAAGAGAGTCTGTGCGTAAATATGATCAATATAAATGGTTGGCTACACGAGGAGTAGATGAAGAATCTCTTCTCAAAGGACTTCCCGTCGACCTTCGGAGAGACATCAAGCGCCACCTCTGTCTTGATCTAGTTCGAGGAGTGCCGTTATTTGATCAAATGGATGAGAGGACGCTAGATGCAATATGCGAGAGGCTAAAGCCAGCATTGTGCACTGAGGGGACCTATCTTGTTCGTGAGGGTGATCCTGTGAATGAGATGCTCTTCATAATTCGAGGTCATCTTGATTCTTACACCACCAACGGAGGCCGTGTTGGGTTCTTCAACTCGTGCCTCATTGGGCCAGGTGATTTCTGTGGCGAGGAACTATTAACTTGGGCCTTGGATCCACGGCCCAGTGTGATACTTCCTTCATCAACTCGAACAGTTAAGGCCATCTCAGAAGTAGAGGCCTTTGCACTCATAGCCGAAGACTTAAAGTTTGTTGCATCTCAATTTAGAAGATTGCACACTAAACAACTTAGACATAAATTCAGGTTTTACTCACACCAATGGAGAACATGGGCTGCTTGTTTCATTCAAGTTGCATGGAGAAGGCATAAGAAAAGGAAAGAAGCTTCTCAGCTTAGGGAGAGAGAGAGGGAGAATGTGCAAGTTGCTGAGCCTCAAACACCAAGTTCAGGGTCAGGCTTTGTTGGGTATGGAAGGAGTGGTAGGAAAGGTGTTAATATGCATTCTGGGACTGCTTCTTCTGGAGTAGTTAGCTCTTTGCTGAAGCCAGCAGAACCCGATTTTTCTGTTGATGAATAA 2109 0.4253 MGFGHSRSERFEDDPEQAKVPSNKGDNGIKIKYHIDGTQIPKSSSKMAQKKVTRKKFLQARVLSRVFSEDYERVKRKVLDPRGQTIQRWNKIFLVACIVSLFVDPLFFYLPMVRDEACIDVEITHEVILTLVRSVGDCFYLIQILMKFRTAYVAPSSRVFGRGELVVGYSKIAFRYLRKGFWLDFVAALPLPQVLIWIVIPTLKGSTMANTKNVLRFFIIFQYLPRLFLIFPLSSQIVKATGVVTQTAWAGAAYNLMLYMLASHKKILGACWYLLSIERQEACWRSVCNLEKSFCEYGFFDCHRVKDALRISWFVASNISNLCSPNDNFYQFGIYADAVTSQVTSSAFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMVAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPPELRESVRKYDQYKWLATRGVDEESLLKGLPVDLRRDIKRHLCLDLVRGVPLFDQMDERTLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRVGFFNSCLIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHTKQLRHKFRFYSHQWRTWAACFIQVAWRRHKKRKEASQLRERERENVQVAEPQTPSSGSGFVGYGRSGRKGVNMHSGTASSGVVSSLLKPAEPDFSVDE* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2192 702 Pfam Ion transport protein 88 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr2g2192 702 MobiDBLite consensus disorder prediction 1 20 - -
Apr2g2192 702 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 702 - -
Apr2g2192 702 PANTHER - 12 702 - -
Apr2g2192 702 MobiDBLite consensus disorder prediction 1 28 - -
Apr2g2192 702 CDD CAP_ED 483 614 IPR000595 -
Apr2g2192 702 Gene3D Helix hairpin bin 410 474 - -
Apr2g2192 702 SUPERFAMILY Voltage-gated potassium channels 80 405 - -
Apr2g2192 702 MobiDBLite consensus disorder prediction 639 688 - -
Apr2g2192 702 Gene3D - 90 407 - -
Apr2g2192 702 Gene3D Jelly Rolls 481 601 IPR014710 -
Apr2g2192 702 ProSiteProfiles IQ motif profile. 619 648 IPR000048 GO:0005515
Apr2g2192 702 ProSiteProfiles cAMP/cGMP binding motif profile. 483 580 IPR000595 -
Apr2g2192 702 SMART cnmp_10 483 614 IPR000595 -
Apr2g2192 702 SUPERFAMILY cAMP-binding domain-like 413 610 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2192 Apr-Chr2 27093220 27096867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2192 52 701 Ion Channels AT2G28260 74.462 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2192 K05391 - gmx:100811847 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2192 2 27093220 27096867 Apr2g2192 2 27093220 27096867 ECH
Apr2g2192 2 27093220 27096867 Apr3g1349 3 28001165 28005324 PCT