Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2191 ATGTTCCTTACTTCCTTTCCTTTACGTGCTTTGTATAGGTTGCAATATATGAGGCCTCAACTCAATATTGTTGTGGCTCTTGTTATTAGCTTGCTCTGGATTCAGCACTCAATTTGTGATGAACCTTCTGATACTGGCCTAAACAAGTGGAAATGCAGATGCTCTTCTATCCAAGGGAAACATAAATATTCTCTTGCTAATTGTTCCAAGTCATGTGATTGCCATTCAGATGCTGAAGAGAGTGCATCCATATGGACATGCATATGTGGTCCGAATGGGTTTCCTAAAGTGAAAGCAAATGGACATAACCTTAGTTGCTTTAATGCCTGCAACTGCACCTCGGGAACTATCAGGATGCCACTAGGTTCAACTTCAAAGAAACAAATTTCAAGCAATATTGTAGTAGTTATTTTATCAATTTGTGTTATATGCACAACTATTGCATTTCTTACCTCAGTTGTATGTCATGTATGGCGGAGGGAGAGATGTCCTAGTCAATCACCAATGATATCATCAGACAAGGAAACAAGTTACAGTAGTACCACAAACTTAATTAGTCACAGGACTTCTTCAGTTCCAGAAGCAAAAATTTCTATAAATTCTTCTATCAGTCATATTACAGGATGCTTTCGGAGGGCCTCTTTCTTGTTTGGGAGCCAAAGAGAAACCTTTCATGGAAATATCATTCAATTTTCGTTTGCTGAACTGGAAAATGCCACTGAAAATTTTTTGGCCTCCAACCTAGTTGGACTAGGTGGAAGTAGTTATGTATACCGTGGCCGGTTGAAAGATGGTAGCTATGTGGCAGTCAAGAGACTAAAAGATCAAAGAGGGCCTGAAGCAGACTCAGAATTTTTTACAGAGATTGAACTGTTGTCTAGACTTCATCATTGTCATCTGGTGCCATTGGTGGGATACTGCTCAGAATTAAAAGGAAAAAATGTTCAAAGGTTACTAGTGTTTGACTACATGACTAATGGAAATTTGAGGGACCGCTTAGATGGAATTTTTGGAAAGAAAATGGATTGGTCTACTCGCGTTACAATTGCATTAGGAGCTGCAAGGGGGTTGGAGTATCTTCATGAAGCAGCTGCCCCAAGAATTCTGCACAGAGATGTCAAATCCACAAACATTCTTCTGGATAAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGAGAGCTGATGACCACCCTAGTTGTTCAGATTCTCCAGCAAGAATGCATGGAACATTTGGCTATTTTGCACCTGAGTATGCAATTGTTGGGAGAGCCTCTCTTGAATCAGATGTCTTCAGTTTTGGAGTGGTTCTTCTTGAACTTATTAGTGGTCGGCAACCTATACTTAAATCTGCAGGCAAAGAAGAAAGCCTTGTTATATGGGCTGCTACTCGCTTACAGGACAATAGGCGAGTAATTACTGAGCTGGCTGATCCACAATTGAAAGGAAACTTCCCAGAAGAAGAGATGCAGATAATGGCATTCTTAGCAAAAGAGTGCTTGCTTTTGGATCCTGACACTCGACCAACTATGAGTGAAGTTGTTCAAGTTCTTTCAAGTATTTCCCCAGGAAAATCTAGAAGGAGAATAAACATTCCAATGAGCATTTTTCAGGAACCGGAGGATGCAGAGAAGCAAAGGCAAGCTCCATCGAGTAGATTTTTAGCTCATAATTTATTGCCATTGGGTGTTGACCACAATTTTCATGTTGGTAATGAAAATAAAGATGTATATATAGCTTCATTGGGGCATATGGAGAGTTTGATCCTCTCAACTTCAAAAGGTGAAAGCCTGCATGCATCAGAAGACGAAATGGTAGATTTAACCGAGCCTCGTTTTGAATCATTTTTCATGACCAACGTTAATTTCCCTTGA 1887 0.3975 MFLTSFPLRALYRLQYMRPQLNIVVALVISLLWIQHSICDEPSDTGLNKWKCRCSSIQGKHKYSLANCSKSCDCHSDAEESASIWTCICGPNGFPKVKANGHNLSCFNACNCTSGTIRMPLGSTSKKQISSNIVVVILSICVICTTIAFLTSVVCHVWRRERCPSQSPMISSDKETSYSSTTNLISHRTSSVPEAKISINSSISHITGCFRRASFLFGSQRETFHGNIIQFSFAELENATENFLASNLVGLGGSSYVYRGRLKDGSYVAVKRLKDQRGPEADSEFFTEIELLSRLHHCHLVPLVGYCSELKGKNVQRLLVFDYMTNGNLRDRLDGIFGKKMDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGMAKNLRADDHPSCSDSPARMHGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPILKSAGKEESLVIWAATRLQDNRRVITELADPQLKGNFPEEEMQIMAFLAKECLLLDPDTRPTMSEVVQVLSSISPGKSRRRINIPMSIFQEPEDAEKQRQAPSSRFLAHNLLPLGVDHNFHVGNENKDVYIASLGHMESLILSTSKGESLHASEDEMVDLTEPRFESFFMTNVNFP* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2191 628 Gene3D Phosphorylase Kinase; domain 1 217 323 - -
Apr2g2191 628 ProSiteProfiles Protein kinase domain profile. 243 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2191 628 ProSitePatterns Protein kinases ATP-binding region signature. 249 271 IPR017441 GO:0005524
Apr2g2191 628 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 18 622 - -
Apr2g2191 628 SMART serkin_6 243 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2191 628 Gene3D Transferase(Phosphotransferase) domain 1 324 538 - -
Apr2g2191 628 SUPERFAMILY Protein kinase-like (PK-like) 223 522 IPR011009 -
Apr2g2191 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 368 380 IPR008271 GO:0004672|GO:0006468
Apr2g2191 628 CDD STKc_IRAK 249 525 - -
Apr2g2191 628 Pfam Protein kinase domain 247 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2191 628 PANTHER OS01G0253100 PROTEIN 18 622 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2191 Apr-Chr2 27084788 27090080 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2191 17 625 Receptor kinase-like Gene Family AT2G28250 49.266 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Apr2g2191 Pkinase 8.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2191 - - gmx:100499641 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2191 2 27084788 27090080 Apr2g2191 2 27084788 27090080 ECH
Apr2g2191 2 27084788 27090080 Apr3g1347 3 27975372 27981941 PCT