Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2189 ATGTTACGGCATCGGAAGCAAGAGAACGGGAATGGTGACGTCGACCCGTTGAAGTGGAAGGACGCGGCGGAGTCGTTGAAGGGGAGCCATTTGGAGGAAGTGAAGAGGATGGTAGAGGATTACGGGAAACCGGTTGTCACGGTTGGAGGAGACACTTTGACGGTGGGGGAGGTGGTGGCCGTGGCGGAGAGGAGGATGGCGGTGGAACTCAATGATGAGGCCAAGGTGGGGATGAAGGCTAGCTTTGAGTGGGTGATGGAGAACATCCACAAAGGAACTGATTGTTATGGGGTCACTACTGGCTTTGGTGCAACCTCACACCGAAGAACCACTCAGGGTGTGGCTCTTCAGGCTGAGCTCATTAGGTTTTTGAATGCTGGAATTTTTGGGGATGGAACAGAAGCATGCCACACTATGCCATGCAGTGTAACAAGAGCTGCAATGTTGGTAAGGATCAATACCCTCCTTCAAGGCTACTCTGGCATCAGGTATGAAATACTAGAAGCAATTGCAAAACTACTCAACAAAGGCATTACACCATGTTTGCCACTGCGTGGTTCAATTTCAGCATCAGGGGACTTAGTTCCATTTTCATACATGGCTGGACTATTGACAGGAAGGCCTAATTCAAAGGCTATTGGGCCCAATGGTGAGACCCTAAGTGCTGCAGAAGCTTTCCATCTAGCTGGTATTTATGAGGGTTGCTTTAAGTTGCATCCCAAGGAGGGTCTTGCACTTGTTAATGGAACTGGGGTTGGAGCTGGAATGGCTTCTATAGTATTGTTCGAGGCTAATATCCTAACCATATTATCTGAAGTCATGTCTGCTATTTTTGCTGAAGTCATGCAAGGGAAGCCAGAGTTCACTGACCATTTGACTCACAAATTGAAGCATCATCCTGGCCAGATTGAGGCTGCAGCATTAATGGAACATATCTTGCATGGAAGTGCTTATGTTAAAGCAGCACAAAAGTTGCATGAAATAGACCCCTTCAGAAAGCCTAAGCAAGATAGATATGCTCTTCGGACTTCACCACAATGGTTAGGTCCTCAAATTGAGGTTATTCGGTTATCAACCAAATCCATTGAGAGGGAGATCAACTCTGTGAATGATAATCCTTTGATTGATGTGTCAAGAAACAAAGCTTTGCATGGTGGCAATTTTCAAGGTACCCCAGTGGGGGTTTCAATGGACAACACAAGATTGGCTTTGGCTGCAATTGGAAAACTCCTTTTTGCTCAAATGTCTGAGTTGGTTAATGATTTCTACAATAATGGGTTGCCTTCAAATCTCTCGGGGGGTCACTGTCCAAGTTTGGATTATGGATTAAAGGGTGGTGAGATAGCAATGGCTGCGTATTGTTCTGAGCTTCAGTATCTAGCAAACCCTGTTACCAATCATGTGCAAAGTGCAGAACAACACAACCAGGATGTGAATTCATTGGGATTAATCTCTGCCAGGAAAACGGCTGAAGCTGTTGAAATTTTAAAGCTCATGTCATCAACTTTCTTGATTGCTCTCTGTCAAGCTATAGATTTGAGGCATTTGGAGGAGAACCTAAAGAACACAGTTAAGAATATGGTGAGCCAAGTGGCCAAAGATGTCTTGACACTGGGAGTCAATGGGGAGTTTCATTATTCCAGGTCTTGTGAGAAAGATTTACTTAGAGTGGTCGAGTGTGAGTATGTTTTTGCCTACATTGATGATCCATGCAATGCCGCTTACCCACTTATGCAAAAACTGAGGCAAGTGCTAGTGGAACATGCATTGAGGAGTAACAATGGTTTGAAAAGTATAAATGCTTCTATTTTCCTTAAGATTGGTGCCTTTGAAGAGGAACTGAAAAGAGTGTTGCCCAAAGATGTTGAATCAACAAGGAATGCCTTTGAAAAAGGAAGTTCAGCAAGTCCTAACAAAATTAAGGAATGCAGGTCCTATCCATTGTATAAGTTTGTTAGAGAGGAATTGGGTACAGAGTTTTTAACTGGGGAGAAAATTAAATCGCCTGGTGAAGATTTTGACAAAGTTTATAATGCAATTACTAAGGGAAAGATAATAAACCCAATGTTCGAATGCCTCAAGGATTGGGATGGTACTCCTCTTCCTATATGTTGGACCTCCACAGACCTTCATTAG 2136 0.4382 MLRHRKQENGNGDVDPLKWKDAAESLKGSHLEEVKRMVEDYGKPVVTVGGDTLTVGEVVAVAERRMAVELNDEAKVGMKASFEWVMENIHKGTDCYGVTTGFGATSHRRTTQGVALQAELIRFLNAGIFGDGTEACHTMPCSVTRAAMLVRINTLLQGYSGIRYEILEAIAKLLNKGITPCLPLRGSISASGDLVPFSYMAGLLTGRPNSKAIGPNGETLSAAEAFHLAGIYEGCFKLHPKEGLALVNGTGVGAGMASIVLFEANILTILSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAALMEHILHGSAYVKAAQKLHEIDPFRKPKQDRYALRTSPQWLGPQIEVIRLSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGHCPSLDYGLKGGEIAMAAYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMSSTFLIALCQAIDLRHLEENLKNTVKNMVSQVAKDVLTLGVNGEFHYSRSCEKDLLRVVECEYVFAYIDDPCNAAYPLMQKLRQVLVEHALRSNNGLKSINASIFLKIGAFEEELKRVLPKDVESTRNAFEKGSSASPNKIKECRSYPLYKFVREELGTEFLTGEKIKSPGEDFDKVYNAITKGKIINPMFECLKDWDGTPLPICWTSTDLH* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2189 711 Gene3D - 517 638 IPR023144 -
Apr2g2189 711 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 15 694 IPR005922 GO:0005737|GO:0006559|GO:0016841
Apr2g2189 711 SUPERFAMILY L-aspartase-like 15 704 IPR008948 GO:0003824
Apr2g2189 711 CDD PAL-HAL 52 514 IPR001106 -
Apr2g2189 711 Gene3D - 7 250 IPR024083 -
Apr2g2189 711 PANTHER HISTIDINE AMMONIA-LYASE 12 704 IPR001106 -
Apr2g2189 711 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 12 704 - -
Apr2g2189 711 Gene3D Fumarase/aspartase (Central domain) 252 698 - -
Apr2g2189 711 Pfam Aromatic amino acid lyase 53 530 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2189 Apr-Chr2 27065337 27067944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2189 15 704 Monolignol Biosynthesis Gene Families AT2G37040 75.000 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2189 K10775 - vvi:100241575 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2189 2 27065337 27067944 Apr2g2189 2 27065337 27067944 ECH