Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2186 ATGAGCGGTTCAAGACCTGAGTGTCACGTAGCACAGGAAATTCGGCGTGAGAAATTGAGAATCCATAACAGTTCGCAGCATTTACACGAATTCCCTAGCAATCTGGAACAGTTATCGTTACACCCGGGGTTTAACTTGGGTCTTGTTGAAGTGAGGAATGTTAGAAATGCCAACATGCTTGATGAACCTGAGCCTGCTGTTTTTTCCTCAGAAATGCCAAACTTTTCGACGGCTTCGAACCCTTTGGGTGCTCCAAGGAACGCGTTGGAGTATCATCAAGAACTAGGTGCAGCTGAACCGAGTAGTAGGCTAATGATGAATAATCAATATGGTTCATTTCCCCATTCCATCTCTGCTATTCATTCTTCCCAAAAAGAACAGTGTGAACTTCGTAATTTTGGAAATTGGAGGAACAGTGCCTCCCATCAAGGTTCTGATTGGTTCGTAAATTATGCGAGCAGTTCTCTTGTCAATGGAAGCAATGCGATTGCTAACTCTTTTTTGGTTTCTGAGCTCGACAATGTGGCTGGTTACAATGAACTTAATGTACAGTTTGGCAATGCATCTGATGAAATGGGTGGTACAGAAATTCATAAGCAATTAGGTGGGTCGCAGAATCCTCCTCCTTCTTCATCTCCGTTGTTTCAAAATGCTTTGCAAGATATTGTGAAATCAGCTTCTATCAGTGCCCACGGGCAAGACATGGCTTCCCTGACGCAACAAAATGGTCACGGCGTTTGGGTGGGGAATGCGAGCGGAGTTGAGATTCAACCAAGTTATGTAAATCAGCCAAATCAGTTGCGTTTTGGGTGGACAAATCGAACAATTGACAATACTATGATGAATGATTCAAATCCTCAAAGCTTATCCTTGTCACTTTCCTCGAACGCACAATCCAAGCCTTCTGTTTCTCAGATTGAAGAAAGGTCTGCATCAGATGACCTTCAATCTGGGTGTGGCAATATTTCAAAGGATCCTCAATGTTTGAAGCATATGAAATCTATTGTGAAGCCATCTATGATTTCTAGAGATTGTGGGAAATCATTATTTCAAGACACGGTGGGGATGCATTCAAAGAGTACTAGTTATAGAAATGTGGGTCCCCTTGGTCCTTTCACCGGGTATGCTACTATTCTGAAGAATTCAAGGTTCTTAAAGTCTGCTCAACAGTTGTTAGATGAGATTTGTTGTTTTTCTGATTCAAAATTAGCGAAAGCATGTGATGTTTCAGAGAGAGTCTATGGAGAAGTTAGTGCTTCTACTTCTATTGATACTGTAACTGTGAATGAAACTGGGGTTACTGCAATAGGTTGCAATTCAGGTTCTTCACCGTCTATGTTGTATATATCAAAGGAAAATAGAGCTGTTTGGGGAGTTGGAAGTAGCTTTGGCCTTTCTTCGCGGCTGGATTATCAACAAAAGAAAGCAAAGCTTCTGTACATGCAAGAGGAGGTTACCAGGCAATGCAAGCAGTACCATCAACAAATGCAAATGGTTGTTTCATCCTTTGAATCAGTAGCGGGTCTCAGTTCTGCTACCCCTTACATATCCTTGGCTCTCAAATCAGTGTCAAAGCACTTCAAGTGCCTAAAACATTCTATCTCAGAACAACTCAAACTTATAAGCGAAGTGTTAGGAGAGGATTCTTCAATACCCAAAACAAGTACAAGTAGTAAAGGTGACACTAATGTGGCAAGGCTAAGATGCATGGACCAAAGCTTTCAAAAGAGCAAATGTGGGAGGGGTACTACAGACTTTCTTGAACCACAACAGCATGTGTGGAGGCCCCAAAGAGGCTTACCAGAACGTGCAGTGGCAATTCTTAAAGCTTGGCTATTCGAGCATTTCCTTCATCCTTACCCTACAGACACTGATAAACACATGCTAGCAACTCAAACAGGTCTTTCACGAAACCAGGTATCAAATTGGTTCATAAATGCTAGAGTCCGCGTGTGGAAGCCGATGGTTGAGGAAATACACATGCTTGAAACAAAAGTAACAGGCCCCAAGGAGAACAGTAATGAAAACGTTCAAACTACTAGCACTGAAGGTGATACCAGCCAGCCAAGAGTGGATAAGCCTTTGAGCAAGTTTTGTGGTATGAATCCAGTACCTGAAAACCAGTTTCCGAGTTTGGAAATGAGCTCATCCATAGCTACCAATACAGAAGAAGAATGGAGTCAAGAGAAACGGTCAAAATTGGAATGCCAAGTGACATCAAACATTGATGGTACAATGATGGGTTTTATCCCATATCGACGTGGTGGACTTGAGGTTGGGGGAATTGGGTCTGTGTCACTAACACTGGGTCTTACGCATGGCGTTGAAGGTGTACAACACCAACAACAATTGCAAGAGGAGCATCTTAGACATCACCTTGGAGGGCACATGATACATGACTTTGTAGGCTGA 2412 0.4258 MSGSRPECHVAQEIRREKLRIHNSSQHLHEFPSNLEQLSLHPGFNLGLVEVRNVRNANMLDEPEPAVFSSEMPNFSTASNPLGAPRNALEYHQELGAAEPSSRLMMNNQYGSFPHSISAIHSSQKEQCELRNFGNWRNSASHQGSDWFVNYASSSLVNGSNAIANSFLVSELDNVAGYNELNVQFGNASDEMGGTEIHKQLGGSQNPPPSSSPLFQNALQDIVKSASISAHGQDMASLTQQNGHGVWVGNASGVEIQPSYVNQPNQLRFGWTNRTIDNTMMNDSNPQSLSLSLSSNAQSKPSVSQIEERSASDDLQSGCGNISKDPQCLKHMKSIVKPSMISRDCGKSLFQDTVGMHSKSTSYRNVGPLGPFTGYATILKNSRFLKSAQQLLDEICCFSDSKLAKACDVSERVYGEVSASTSIDTVTVNETGVTAIGCNSGSSPSMLYISKENRAVWGVGSSFGLSSRLDYQQKKAKLLYMQEEVTRQCKQYHQQMQMVVSSFESVAGLSSATPYISLALKSVSKHFKCLKHSISEQLKLISEVLGEDSSIPKTSTSSKGDTNVARLRCMDQSFQKSKCGRGTTDFLEPQQHVWRPQRGLPERAVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKVTGPKENSNENVQTTSTEGDTSQPRVDKPLSKFCGMNPVPENQFPSLEMSSSIATNTEEEWSQEKRSKLECQVTSNIDGTMMGFIPYRRGGLEVGGIGSVSLTLGLTHGVEGVQHQQQLQEEHLRHHLGGHMIHDFVG* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2186 803 MobiDBLite consensus disorder prediction 281 319 - -
Apr2g2186 803 SMART prehox3 373 536 IPR006563 -
Apr2g2186 803 CDD homeodomain 594 655 IPR001356 GO:0003677
Apr2g2186 803 Pfam Associated with HOX 378 535 IPR006563 -
Apr2g2186 803 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 31 775 - -
Apr2g2186 803 SUPERFAMILY Homeodomain-like 596 661 IPR009057 -
Apr2g2186 803 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 31 775 - -
Apr2g2186 803 MobiDBLite consensus disorder prediction 667 689 - -
Apr2g2186 803 Pfam Homeobox KN domain 611 650 IPR008422 GO:0003677|GO:0006355
Apr2g2186 803 MobiDBLite consensus disorder prediction 665 691 - -
Apr2g2186 803 ProSiteProfiles 'Homeobox' domain profile. 591 654 IPR001356 GO:0003677
Apr2g2186 803 SMART HOX_1 594 658 IPR001356 GO:0003677
Apr2g2186 803 MobiDBLite consensus disorder prediction 190 212 - -
Apr2g2186 803 Gene3D - 597 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2186 Apr-Chr2 27006036 27011343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2186 364 664 Homeobox Transcription Factor Family AT5G02030 47.351 3.37e-72 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Apr2g2186 POX 4.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2186 - - gmx:100809720 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2186 2 27006036 27011343 Apr2g2186 2 27006036 27011343 ECH
Apr2g2186 2 27006036 27011343 Apr3g1341 3 27875800 27882490 PCT