Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2175 ATGGGCAAGTTCAGTAGTGTCAGAAGCAGCAGCAAAAAGAAAGGTGGAAGTGGCATTGTTAAGTTCAAGTTTGTGGTTGAAAAGCTCCAAAAGAGGCTCTTACTTGGGAGAAACAAAGAGGGTTGTGACTCAACCTATGTGCCAGAAGATGTGAAGGAAGGACACTTTGCTGTGATTGCTGAGGGTGGAGAGGAACCGAAGAGATTCGTGTTGCCACTAAGCTGTTTAAACAACCCAACATTTTTGAAGCTATTGGAGGAAGCAGCAGAAGAGTATGGTTTTGATCATGAAGGTGCACTAACCATTCCTTGCAGGCCTAGTGAGCTTGAGAGGATATTGGCGCAACAATGGCATGGACAGAGAACTGAAACTACTGGATTAAGGTGGACTTGTAATAAAACCATGGTTTTTTAA 414 0.4348 MGKFSSVRSSSKKKGGSGIVKFKFVVEKLQKRLLLGRNKEGCDSTYVPEDVKEGHFAVIAEGGEEPKRFVLPLSCLNNPTFLKLLEEAAEEYGFDHEGALTIPCRPSELERILAQQWHGQRTETTGLRWTCNKTMVF* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2175 137 Pfam Auxin responsive protein 37 114 IPR003676 GO:0009733
Apr2g2175 137 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 25 121 - -
Apr2g2175 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2175 Apr-Chr2 26867057 26867470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2175 16 104 Calmodulin-binding Proteins AT5G20810 41.935 1.91e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2175 - K14488 gmx:102668167 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2175 2 26867057 26867470 Apr2g2175 2 26867057 26867470 ECH
Apr2g2175 2 26867057 26867470 Apr3g1329 3 27733385 27733837 PCT