Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2147 ATGGCGGAGGACCGGAATGAGGTGAGTGATTACAGTTCGGAGGACGAAGGGACCGAAGATTACAGGCGTGGAGGGTACCATGCGGTTCGGATTGGAGACACTTTCAAGAATGGGTGTTATGTGGTGCAGAGCAAGCTCGGTTGGGGCCATTTTTCCACTGTGTGGCTCGCTTGGGACACTTACAAATCGCGATATGTTGCCTTGAAAATTCAAAAGAGTGCTCAGCATTACACTGAAGCAGCAATGGATGAAATAAAGATTCTCAAAGAAATTGCAGAAGGGGACCCAGACGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTTAAACATTCGGGGCCTAATGGCCAGCATGTTTGCATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAGTACAGTGATTACCGAGGCGTTCCCCTTCCCACAGTCAAAGAAATTTGTTTCCATATCTTGGTGGGTTTGGATTACTTGCACCGTGAACTTTCGGTGATACACACTGATTTGAAGCCTGAGAATGTCTTGCTTCTGTCTCCAATAAATCAGTCTAAGGATCCCAGAAAATCAGGTGTTCCACTTATCCTTCCAAACGCCAGGGACAAGGCTGTGACCAAGAATGGGACCACAAAAGATGATAAAAGTTTGAATGGAGATCTGACCAAGAACCAGAAAAAGAAATTGCGGAAAAAGGCTAAAAAGGCAGCTCAATGCTGTGTTGGGAAGGAAAATACTGAGGAAGCTGAGGAGGATTCTAAAAAATTGCTTGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGCAATGCTTGTTGGACCTATAAACAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTCTTCTTGGATCTAGATACTCAACTCCAGCAGATATATGGTCTTTTGCTTGCATTTGTTTTGAGCTTGCCACCGGGGATGTTCTTTTTGATCCTCATAGTGGTGACAACTATGATAGAGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGGATGATGCCTCGCAAGATTGCACTTGGTGGTCGCTATTCCCGTGATTTTTTCAATAGATATGGTGATTTGAGGCATATTCGTCGGTTGCGTTTCTGGCCCCTTAACAAGGTCCTGATGGAGAAGTATGATTTCAGTGAGCAAGATGCAACTGACATGGCTGACTTCCTTGTTCCATTACTTGATTTTGTCCCTGAGAAGAGACCAACTGCTGCTCAGTGCCTTAGTCATCCATGGTTCAGTGCAGGTCCTCGAACTCTTGAGCCCTCGTCAACTACTATGCAGCATGATGCTATTGACAAGGAAATGTCTGAAAAGATGCAGAGGGAAAAGGCTGAGTTGGAAGGTGTGGAAGTTGGTATGAGTAATATAGCCATAGGTGGAACTTCTCTTTCTCTTGTCTATCAAACTTCCACAAAACCTTAG 1461 0.4408 MAEDRNEVSDYSSEDEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTYKSRYVALKIQKSAQHYTEAAMDEIKILKEIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPTVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSPINQSKDPRKSGVPLILPNARDKAVTKNGTTKDDKSLNGDLTKNQKKKLRKKAKKAAQCCVGKENTEEAEEDSKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSRYSTPADIWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLMEKYDFSEQDATDMADFLVPLLDFVPEKRPTAAQCLSHPWFSAGPRTLEPSSTTMQHDAIDKEMSEKMQREKAELEGVEVGMSNIAIGGTSLSLVYQTSTKP* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2147 486 Gene3D Phosphorylase Kinase; domain 1 26 125 - -
Apr2g2147 486 Gene3D Transferase(Phosphotransferase) domain 1 94 425 - -
Apr2g2147 486 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 255 477 - -
Apr2g2147 486 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 241 - -
Apr2g2147 486 SUPERFAMILY Protein kinase-like (PK-like) 35 435 IPR011009 -
Apr2g2147 486 Pfam Protein kinase domain 262 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2147 486 Pfam Protein kinase domain 40 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2147 486 ProSiteProfiles Protein kinase domain profile. 40 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2147 486 SMART serkin_6 40 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2147 486 PANTHER SERINE KINASE-LIKE PROTEIN 255 477 - -
Apr2g2147 486 PANTHER SERINE KINASE-LIKE PROTEIN 8 241 - -
Apr2g2147 486 CDD STKc_SRPK 29 425 - -
Apr2g2147 486 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Apr2g2147 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2147 Apr-Chr2 26612215 26616235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2147 1 474 EF-hand Containing Proteins AT5G22840 66.346 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Apr2g2147 Pkinase 5.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2147 K08832 - bvg:104898532 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2147 2 26612215 26616235 Apr2g2147 2 26612215 26616235 ECH
Apr2g2147 2 26612215 26616235 Apr3g1292 3 27398522 27402779 PCT