Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2121 ATGAATTTTGTGATCGAATCCCAACTTTCATTTCAACCTTCTGATCGCCAATTATCTCCATGCACACAACCCAAAAACCCTAATCCAGTTTCAGAATCAGTGAAGGCACAATTAGCGTCACACAAAAGGAAAGGAGGGAGAAAGAAGTTTCAAGAGACCCGCCACCCAATTTACAGAGGTGTTCGAGAAAGAAAGGGTAAATGGGTTTGTGAACTAAGGGAACCAAAGAAGAGTTCAAGGATATGGTTAGGGACATACCCTACACCTGAAATGGCAGCTAGGGCATATGATGTGGGTGCCCTAGCAATTAGAGGCACTTCAGCAGTGCTTAACTTTCCAAATTCAGCTTCTTTTCTTCCAATTCTTAAGTCATCTTCAGCTAAAGATATAAGAGAAGCTGCAGCTGAAGCTGCTGAGAATTTTAGACCAAGCACTTCTTTTTCTTTGTCCAATTCTCACAACAAAAAAATAAGACGGAAAATTAAGTGTAAGAAAGGTAAAAAGGCAGTGTTCTTTGATGAGGAGGCATTGTTTAATCCAGGTTTCTTGGATAGCATGGCAGAGGGTTTGTGTATTTTCCCAGTATCAATGGAAAGCTCATTGGATTGTTGGGATGATCTTGTTTATAGCATGGACTTCAATTTATGGACAGATTGA 657 0.4018 MNFVIESQLSFQPSDRQLSPCTQPKNPNPVSESVKAQLASHKRKGGRKKFQETRHPIYRGVRERKGKWVCELREPKKSSRIWLGTYPTPEMAARAYDVGALAIRGTSAVLNFPNSASFLPILKSSSAKDIREAAAEAAENFRPSTSFSLSNSHNKKIRRKIKCKKGKKAVFFDEEALFNPGFLDSMAEGLCIFPVSMESSLDCWDDLVYSMDFNLWTD* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2121 218 SUPERFAMILY DNA-binding domain 57 115 IPR016177 GO:0003677
Apr2g2121 218 CDD AP2 56 115 IPR001471 GO:0003700|GO:0006355
Apr2g2121 218 Gene3D AP2/ERF domain 57 114 IPR036955 GO:0003700|GO:0006355
Apr2g2121 218 ProSiteProfiles AP2/ERF domain profile. 57 113 IPR001471 GO:0003700|GO:0006355
Apr2g2121 218 SMART rav1_2 57 119 IPR001471 GO:0003700|GO:0006355
Apr2g2121 218 MobiDBLite consensus disorder prediction 10 50 - -
Apr2g2121 218 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 6 217 - -
Apr2g2121 218 Pfam AP2 domain 56 105 IPR001471 GO:0003700|GO:0006355
Apr2g2121 218 MobiDBLite consensus disorder prediction 10 35 - -
Apr2g2121 218 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 6 217 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2121 Apr-Chr2 26393411 26394202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2121 42 217 AP2-EREBP Transcription Factor Family AT4G25470 46.995 1.95e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr2g2121 AP2 7.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2121 - - var:108332912 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2121 2 26393411 26394202 Apr2g2121 2 26393411 26394202 ECH