Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2117 ATGGACCCATGGCTCGACGATCTCGCCGACGACCTCCAAAGCCTGAGTTTCGCCTCCACCGCCACCACCACCGCCGACATCAAACGAAGCACCAGCTTCGGCTCCGAAACCACCACGCTAACCGCCTCCACCTCCGCGCACTTAGGAACGAGATCGCTAAACAAACCCCACGCGCCCTCCCGCCGCATCCTCCCCTCCGACCTCCGCTTCTCTCGCCGCCTCGGCTCCGGCGACATAAGCTCCGTCTATCTCGCGGAGCTCAACGACGGTTCTCTGTCTGTGATGTTCGCGGCGAAGGTGATGGACAAGAGGGAGCTAGCGAGCCGTAGCAAGGAGGGAAGAGCCAAAACCGAAAGAGAAATTCTCGAATTGCTTGACCATCCCTTCTTGCCCACACTCTACGCCACCATCGACGCCGCCAAATGGCTCTGCCTCCTCACGGAGTTTTGCCCCGGCGGTGACCTCCACGTTCTCCGTCAACGCCAACCTAACAAACGCTTCCCCGAACCCGCCGTCAGGTTCTACGCATCAGAGGTGTTAGTGGCACTTGAATACCTTCACATGTTGGGCATAGTGTACCGTGATCTGAAGCCCGAGAACGTGCTAGTTCGATCAGACGGCCACATCATGCTTACCGATTTTGACCTCTCGTTAAAATGTGATGATTCCACACCAGCGGCCCAGATCATCTCGGATCAAAAGTCTCCTCGCGTGGCCCCACATAAGGATCCTCACGTGGAACCCTCTCAATTCACCTCGTCTTCCTGCATAATACCCAACTGTATAGTGCCCGCAGTGTCGTGTTTCCACCCAAAACGCAAGCGAAAGAAGAAGCAAAAGCAACATAACGGGCCTGAGTTTGTAGCCGAGCCCATTGATGTCCGATCCATGTCATTCGTGGGGACCCACGAGTACTTGGCTCCTGAAATCGTGTCTGGGGAGGGCCACGGTAGTGCAGTGGACTGGTGGACGTTAGGGGTATTTATATTTGAATTGTTTTATGGTGTCACACCCTTTAGGGGCATGGACAACGAGTTAACTCTAGCAAACATTGTGGCTCGAGCCTTGGAGTTCCCAAAGGAACCCACCGTGCCAGCCACGGCAAAAGACCTCATCTCACAGTTATTGGTTAAGGACCCGGCAAGAAGACTGGGGTCAACAATGGGGGCTTCCGCGATCAAGCACCACCCCTTTTTTCAAGGTGTCAATTGGGCATTACTAAGATGTACACCTCCTCCCTTCGTGCCCCCACCTTATATTAAAGAAGCTGTATCTGATGAAACTTGTCCGCAGACTCCAATTGATTACTATTGA 1314 0.5419 MDPWLDDLADDLQSLSFASTATTTADIKRSTSFGSETTTLTASTSAHLGTRSLNKPHAPSRRILPSDLRFSRRLGSGDISSVYLAELNDGSLSVMFAAKVMDKRELASRSKEGRAKTEREILELLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHVLRQRQPNKRFPEPAVRFYASEVLVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTPAAQIISDQKSPRVAPHKDPHVEPSQFTSSSCIIPNCIVPAVSCFHPKRKRKKKQKQHNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPTVPATAKDLISQLLVKDPARRLGSTMGASAIKHHPFFQGVNWALLRCTPPPFVPPPYIKEAVSDETCPQTPIDYY* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2117 437 CDD STKc_phototropin_like 66 410 - -
Apr2g2117 437 Gene3D Transferase(Phosphotransferase) domain 1 154 224 - -
Apr2g2117 437 SMART serkin_6 68 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2117 437 SUPERFAMILY Protein kinase-like (PK-like) 51 426 IPR011009 -
Apr2g2117 437 PANTHER FLIPPASE KINASE 1-RELATED 1 437 - -
Apr2g2117 437 PANTHER OS11G0150700 PROTEIN 1 437 - -
Apr2g2117 437 ProSiteProfiles Protein kinase domain profile. 68 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2117 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Apr2g2117 437 Pfam Protein kinase domain 71 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2117 437 Pfam Protein kinase domain 296 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2117 437 MobiDBLite consensus disorder prediction 33 58 - -
Apr2g2117 437 MobiDBLite consensus disorder prediction 33 51 - -
Apr2g2117 437 Gene3D Transferase(Phosphotransferase) domain 1 295 417 - -
Apr2g2117 437 Gene3D Phosphorylase Kinase; domain 1 67 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2117 Apr-Chr2 26365752 26369595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2117 1 437 AGC Kinase Gene Family AT3G44610 67.826 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr2g2117 Pkinase 1.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2117 K08286 - gmx:100792738 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2117 2 26365752 26369595 Apr2g2117 2 26365752 26369595 ECH
Apr2g2117 2 26365752 26369595 Apr3g1264 3 27131456 27134428 ECH