Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2095 ATGTACCATCATCACCAACATCAAGGGAAAAACATTCATTCTTCTTCCAGAATGCCAATACCCTCTGAGAGGCACATTTTCCTTCAAACAGGAAATGGGTCTGGTGATTCTGGACTTGTGCTATCAACTGATGCTAAGCCTAGATTAAAATGGACACCAGATCTTCATGCCAGGTTTATAGAAGCAGTCAATCAGTTAGGTGGAGCTGACAAGGCTACTCCAAAAACTGTAATGAAACTCATGGGAATTCCAGGGCTTACTTTATATCATCTGAAGAGCCATCTTCAGAAGTATAGATTGAGCAAGAATCTGCATGGACAAAGCAACAATGTGACACACAAAATCAGTGCAGCCACTGGAGAGAGACTTTCTGAAAACAATGGAACTCACATGAACAAATTAAGTCTTGGACCGCAGGCTAACAAAGATTTACATATAAGTGAGGCACTGCAGATGCAAATTGAAGTTCAGAGAAGGCTCAATGAACAACTTGAGGTTCAGAGACACTTGCAGCTTAGGATAGAGGCCCAAGGAAAATACCTGCAATCAGTGCTAGAGAAAGCTCAAGAAACTCTTGGAAGACAGAATTTGGGAATAGTAGGACTCGAAGCTGCCAAAGTTCAACTTTCAGAATTGGTGTCCAAAGTCTCCTCTCAGTGCCTTAACTCAGCATTCTCAGAGCTAAAGGAACTACAAGGATTTTGCCCTCAGCAGACACAAACCAACCCACCAAATGATTGCTCAATGGACAGTTGCCTCACATCCTGTGACAGATCCCAAAAGGAGCAAGATATTCAAAATGGTGGCATGGGCATAAGACACTTCAACAGCCATGTTTTCATGGAACAAAAGGATGCCACAGAACCTCCCAACAACCTTAGGAACACCGAACTCAAGTGGCGTGATGAAGGGAAAAAGAACACATTTCTTGCCCCAATGAGCAAAAATGAAGAAAGAAGAAGCTATGCTGGTGAAAGCAATTCCAACAACTTATCCATGACCATTGGACTTGAAAGAGAAACAGAAAATAGAAGCAGCATGTATCCTGAGAGACTAATCACAGAAACTCAACCTGATAGTGAGTTCCATCATAGGAACAGAACCAAAACAGAAATAATGAAACCAGTGGATGAAAAAGTTTCTCAAGATTATAGGTTGCCTTCTTATTTTGCAACAGCAAGGTTGGACCTAAACACACATGGAGATAATGAAGCTGCACCCATTTGTAAACAACTGGACTTGAATAGATTCAGTTGGAGCTGA 1263 0.4165 MYHHHQHQGKNIHSSSRMPIPSERHIFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKISAATGERLSENNGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQQTQTNPPNDCSMDSCLTSCDRSQKEQDIQNGGMGIRHFNSHVFMEQKDATEPPNNLRNTELKWRDEGKKNTFLAPMSKNEERRSYAGESNSNNLSMTIGLERETENRSSMYPERLITETQPDSEFHHRNRTKTEIMKPVDEKVSQDYRLPSYFATARLDLNTHGDNEAAPICKQLDLNRFSWS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2095 420 Pfam MYB-CC type transfactor, LHEQLE motif 145 191 IPR025756 -
Apr2g2095 420 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Apr2g2095 420 Gene3D - 45 103 - -
Apr2g2095 420 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Apr2g2095 420 Coils Coil 147 167 - -
Apr2g2095 420 PANTHER MYB-RELATED PROTEIN 2 4 420 - -
Apr2g2095 420 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Apr2g2095 420 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 420 IPR044848 GO:0003700
Apr2g2095 420 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2095 Apr-Chr2 26193342 26195983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2095 78 419 G2-like Transcription Factor Family AT3G04030 51.304 6.66e-98 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr2g2095 Myb_DNA-binding 3.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2095 - - gmx:100810396 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2095 2 26193342 26195983 Apr3g1238 3 26857976 26860965 PCT