Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2077 ATGGAAGTGGTTTCCAAGGAAGCCCAGATGTCGATTGCTGCTTCTTCCATGTTTCCTGGGTTTAGGTTCTGTCCCACCGACGAGGAGTTGATTTCTTATTACCTCAGGAAGAAGCTCGATGGCCATGAAGAAAGTGTTCAAGTCATTTCCGAGGTTGAGCTTTGTAAATATGAACCTTGGGATTTACCAGCAAAATCGTTCATTCAATCAGATAACGAATGGTTCTTCTTCTCTCCCCGTGGAAGAAAGTATCCAAACGGTTCACAGAGTAAAAGGGCAACTGAATGTGGGTATTGGAAGGCCACTGGAAAAGAGCGTAATGTAAAGTCAGGTTCCAATGTTATAGGTACCAAGCGAACTTTGGTTTTCCACTTAGGACGTGCTCCTAAAGGGGAAAGAACTGAATGGATTATGCATGAGTACTGCATCAATGACAAGTCTCAAGATTCTTTGGTCATTTGTCGGCTCAAGAGGAACATGGAGTTCCGTTTGAGTGATGCTCCAAATAGAGCTTCTTCAAGTCAAAGGCACCCCGTGAATTCACATGAAAGTGATTATGCAATCTCAGAAGGTGGTATTGATCCAAGGGGTGTCTGCGAGCAAGACAAAGAGGTTGGATGTAGCTCCAAGCGGAGTAGTAGCAGTTATGGTTCTCCTTCAATGGAACAAATTGATTCTGTCTCTGAATCCAATCAGCGACAACCTAATGAGCCCACTTTGACTGAATCTTCAGGTCAACCAAAGGTGGATGAAGAGGATTGTTATGCTGAGATACTAAAGGATGATATCATCAAATTGGATGAATCATCAATTTCAAGAGAGGGTCAAACAAGATCACAGGATCCTGCACAGATGCATCCTAGCCAAGGCACAGCACAACGAAGAATAAGATTGAGGATTGGGAATCCCAAGCATTCTCCTGCAAAAGTTCGTTTCCCAAGCACAATGCAATCCTCAAAGAGCACCTTTTTCACCACAATGACCAACCGTTTGGTGCTATTTGCTTTCTTCGCTTTCACTTTGATAGCCCTTTATTTTTTGTCCTTATTAAGTGGACTCAAACGATTTAATTATTATGGGAATTGGCTTTATGGGAATCAAGTTGAGGAGGGTGAACTTTTTGGCATCTGGGTAGATTATGTGTATGATCACTATACAGGATTCCTGCAGCTAGAAGTTTCCTTTAAGCTTGATGGTGACGGAATGTTTGGAACCATGTCGAGGCCCATGTTGCTTGTTTTCCTGCTACTCGTACTTATAATCACATCACAGTTCGAGTGGAAGCAACAGCTTGTGGCCGATGTTGACTCAAATCCCAGCTTGTCTCAGAAGCAGCATCAGATTTCAAAGCCTGAAGAAACCGTCAAGGAGAAGATTATCTTAGTGCAAGAGAAGACTATTCGAAGACTGAATGAGCTAGTGCGGCATCTCCAGGAACAACTGCAGCAGTGTAGAGGAAGCAATGGAACTACAAATGGCACTTTAAGTCCTCTAGCTGAGCGAATTCTTGAGCTTGAACGACAGCAAATTTTAGAGGATTAA 1542 0.43 MEVVSKEAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCINDKSQDSLVICRLKRNMEFRLSDAPNRASSSQRHPVNSHESDYAISEGGIDPRGVCEQDKEVGCSSKRSSSSYGSPSMEQIDSVSESNQRQPNEPTLTESSGQPKVDEEDCYAEILKDDIIKLDESSISREGQTRSQDPAQMHPSQGTAQRRIRLRIGNPKHSPAKVRFPSTMQSSKSTFFTTMTNRLVLFAFFAFTLIALYFLSLLSGLKRFNYYGNWLYGNQVEEGELFGIWVDYVYDHYTGFLQLEVSFKLDGDGMFGTMSRPMLLVFLLLVLIITSQFEWKQQLVADVDSNPSLSQKQHQISKPEETVKEKIILVQEKTIRRLNELVRHLQEQLQQCRGSNGTTNGTLSPLAERILELERQQILED* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2077 513 MobiDBLite consensus disorder prediction 269 295 - -
Apr2g2077 513 Gene3D NAC domain 26 165 IPR036093 GO:0003677|GO:0006355
Apr2g2077 513 SUPERFAMILY NAC domain 6 157 IPR036093 GO:0003677|GO:0006355
Apr2g2077 513 Coils Coil 460 487 - -
Apr2g2077 513 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 352 - -
Apr2g2077 513 MobiDBLite consensus disorder prediction 275 291 - -
Apr2g2077 513 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 11 352 - -
Apr2g2077 513 MobiDBLite consensus disorder prediction 167 248 - -
Apr2g2077 513 MobiDBLite consensus disorder prediction 208 245 - -
Apr2g2077 513 ProSiteProfiles NAC domain profile. 17 159 IPR003441 GO:0003677|GO:0006355
Apr2g2077 513 MobiDBLite consensus disorder prediction 167 182 - -
Apr2g2077 513 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2077 Apr-Chr2 26083017 26089498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2077 4 343 NAC Transcription Factor Family AT2G27300 46.049 3.08e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr2g2077 NAM 1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2077 - - gsj:114373381 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2077 2 26083017 26089498 Apr2g2077 2 26083017 26089498 ECH