Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2069 ATGGAAGTTATCCAGATAGAACAAGTCTGCATCTTATTCTGTTTTGGTCTATTTGTAACATTGGGTTATGGTGCTACAGACCCAAATGATGTCAAAGTTTTGAATGATTTCAGAAAAGGGTTGGAAAATCCAGATCTTCTGAAATGGCCAGAGAATGGAGATGATCCCTGTGGGCCTCCTTCATGGCCTTATGTGTACTGTTCTGGAGATAGAGTGAATCAGATTCAGGCTAAGAATCTGGGTCTTAGAGGATCATTGCCTCAAAACTTTAACCAGCTCTCAGAACTCTACAATTTGGGTCTTCAACGCAATAACCTTAGTGGGATGTTGCCTACTTTTAGTGGCTTATCAAAATTGGAATTTGCTTTCTTGGATTACAATGCATTTGATGCAATCCCATCTGATTTCTTTGATGGACTCACCAGCATTAGGGTCTTGTCTTTGGAAGAAAATCCACTGAATGCAAGTAGTGGGTGGTTGTTTCCTAAGGATTTAGAGAAATCAGTGCAATTAACCAACCTTTCTCTGGTGCAATGTAATTTGGTTGGACCATTGCCTGATTTTGTAGGCACATTGCCATCCCTCACAAATCTAAGGCTTTCAGGTAACGAGCTAGCTGGTGCCATTCCAGCAACTTTTGCTCAATCATCCATCCAGGTTTTGTGGTTGAATGATCAACAAGGTGGTGGGTTGACTGGTCCTATTGATGTTATTGCTTCAATGATTTTCCTAAGACAGCTTTGGCTACATGGAAACCAGTTCACTGGGACAATTCCAAGGGACATTGGTAATCTTACTTCCCTGCAGGAACTCAACCTCAATAGCAACCAGCTTGTTGGCTTGATTCCTGAGTCTCTTGCACATATGAACCTTGACATCCTTGTGTTGAACAATAACAAGCTAATGGGTCCAATACCAGAGTTTAAGGCTGCCAATTTTTCTTATGACAACAATTTCTTTTGTCAAACTAAGCCGGGGCTTGAATGTGCCCCTGAGGTTACTACACTGTTGGATTTTCTGGATAAGCTGAATTACCCATCATTTCTCATTTCTGATTGGTCTGGTAATGAACCATGCAGAGCCAGCACAGGGACATGGTTTGGATTGAGCTGCAATTCCAATTCGGAGGTATCTATAATCAATCTTCCTAGACACAAGCTAAATGGTACTCTAAGTCCCTCACTTGCTAGCTTAGATTCACTCCTTGAAATTAGGCTTGCTGGAAACAATATAACTGGCATAGTTCCCGGTGAGTTTAGTGAATTAAAATCTTTGAGGTTGTTAGATTTAAGTGATAACAATCTTGAGCCTCCATTGCCAAAATTTCATAACGATGTGAAGTTTGTTATTGTGGGTAATCCTCTTCTTCCAAATCAAACTGGAGAGAGTCCAACACCTAGTCCAATACCTATTAGAAGCCCACCTTCACCACAGAACCCATCACGTCCTCCATCTTCTCATAAGCCACTTGTTCCAAGTCAGAATTCAAGATCAAATCAATCCAATTCCAAACCAAATGGCTTCAAAAGGTTCAAAACAGTAGCAGTAGTGGCTGGAGTCGCAGTGTTTGCTGTTATAGCTCTTTTGGTTGTTTATCTCCTCCTATGTTGCAGGAAGAACCAAAAAGCCTCATTGGATGCTCCAAGTTCCATTGTGGTTCACCCTCGAGATCCATCTGATCCAGATAATGTGATTAAAATTGCAGTTTCAAATAACAACACTGGAAGCTTATCAACGAAGACTGGGACAAGTTCTCTGAGTAACATTAGTGGTGAAACTCAAAACTCTCACATGCTTGAGGCTGGTAACCTTGTCATCTCTGTACAAGTACTACGCAAGGTTACCGATAATTTTTGTTCGGAAAATGAGCTAGGACGGGGTGGGTTTGGAACTGTTTACAAGGGAGAATTAGAAGACGGGACAAAAATAGCAGTGAAGAGAATGGAGCATGGTGTTATAAGCAGTAAGGCACAGGAGGAGTTTCAAGCTGAAATAGCTGTTCTTTCAAAGGTTCGTCATCGACATTTGGTATCCTTGTTGGGATATTCGGTTGAAGGCAATGAAAGACTTCTGGTTTATGAATATATGCCTCTTGGTGCTCTAAGTCAGCATCTTTTTCATTGGAAAAGCTTGAAATTGGAGCCTTTGTCTTGGTCACAGAGGCTGGCAATAGCACTAGATGTTGCTAGAGGGATTGAATACCTTCATAGCCTTGCCCGCCAAACCTTTATCCACCGAGACCTCAAGTCTTCTAACATTCTGTTGGGTGATGATTTTCGGGCAGAAGTTTCAGATTTTGGTTTGGTGAAGCTTGCACCAGATGGTGAGAAGTCTGTAGTAACCAAGCTTGCTGGGACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACAAAGGTTGATGTGTTCAGCTACGGTGTGGTATTGATGGAACTTCTGACTGGACTAATGGCACTTGATGAGAGCCGGCCTGAGGAAAGCAGGTACTTGGCTGAATGGTTTTGGCAAATTAAAGTAAGCAAAGAGAAGCTCATGGCTGCCATTGATCCAGCTCTGGAAGCAACTGAAGAGACTTTTGAGACCATAACAATTGTAGCTGAACTTGCTGGACATTGCACTGCAAGAGAAGCACACCATAGGCCAGATATGAGTCATGCAGTCAATGTTTTGGCAGCATTAGTGGAAAAATGGCGACCGGTTAATGATGAATTAGATTACTACTCTGGCATTGATTACACACAACCACTTCCTCAAATGTTGAAAATTTGGAAGGAAGCTGAAAGCAAAGAGTTTAGCTATGATGGTACTAGTCTTGAAGATAGTAGAAGCAGTATTGCAGCAAGGCCTATTGGTTTTGCAGACTCCTTTACTTCTGCTGATGCTCGATGA 2901 0.4199 MEVIQIEQVCILFCFGLFVTLGYGATDPNDVKVLNDFRKGLENPDLLKWPENGDDPCGPPSWPYVYCSGDRVNQIQAKNLGLRGSLPQNFNQLSELYNLGLQRNNLSGMLPTFSGLSKLEFAFLDYNAFDAIPSDFFDGLTSIRVLSLEENPLNASSGWLFPKDLEKSVQLTNLSLVQCNLVGPLPDFVGTLPSLTNLRLSGNELAGAIPATFAQSSIQVLWLNDQQGGGLTGPIDVIASMIFLRQLWLHGNQFTGTIPRDIGNLTSLQELNLNSNQLVGLIPESLAHMNLDILVLNNNKLMGPIPEFKAANFSYDNNFFCQTKPGLECAPEVTTLLDFLDKLNYPSFLISDWSGNEPCRASTGTWFGLSCNSNSEVSIINLPRHKLNGTLSPSLASLDSLLEIRLAGNNITGIVPGEFSELKSLRLLDLSDNNLEPPLPKFHNDVKFVIVGNPLLPNQTGESPTPSPIPIRSPPSPQNPSRPPSSHKPLVPSQNSRSNQSNSKPNGFKRFKTVAVVAGVAVFAVIALLVVYLLLCCRKNQKASLDAPSSIVVHPRDPSDPDNVIKIAVSNNNTGSLSTKTGTSSLSNISGETQNSHMLEAGNLVISVQVLRKVTDNFCSENELGRGGFGTVYKGELEDGTKIAVKRMEHGVISSKAQEEFQAEIAVLSKVRHRHLVSLLGYSVEGNERLLVYEYMPLGALSQHLFHWKSLKLEPLSWSQRLAIALDVARGIEYLHSLARQTFIHRDLKSSNILLGDDFRAEVSDFGLVKLAPDGEKSVVTKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRPEESRYLAEWFWQIKVSKEKLMAAIDPALEATEETFETITIVAELAGHCTAREAHHRPDMSHAVNVLAALVEKWRPVNDELDYYSGIDYTQPLPQMLKIWKEAESKEFSYDGTSLEDSRSSIAARPIGFADSFTSADAR* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2069 966 ProSiteProfiles Protein kinase domain profile. 618 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2069 966 MobiDBLite consensus disorder prediction 457 507 - -
Apr2g2069 966 PANTHER OSJNBA0070M12.3 PROTEIN 8 966 - -
Apr2g2069 966 SMART LRR_typ_2 192 215 IPR003591 -
Apr2g2069 966 SMART LRR_typ_2 398 421 IPR003591 -
Apr2g2069 966 SMART LRR_typ_2 265 288 IPR003591 -
Apr2g2069 966 SMART LRR_typ_2 140 163 IPR003591 -
Apr2g2069 966 SMART LRR_typ_2 422 444 IPR003591 -
Apr2g2069 966 SMART LRR_typ_2 241 264 IPR003591 -
Apr2g2069 966 SMART LRR_typ_2 116 139 IPR003591 -
Apr2g2069 966 SMART LRR_typ_2 93 115 IPR003591 -
Apr2g2069 966 SUPERFAMILY Protein kinase-like (PK-like) 596 894 IPR011009 -
Apr2g2069 966 Gene3D Phosphorylase Kinase; domain 1 579 695 - -
Apr2g2069 966 Gene3D Ribonuclease Inhibitor 331 459 IPR032675 -
Apr2g2069 966 Gene3D Ribonuclease Inhibitor 27 326 IPR032675 -
Apr2g2069 966 Pfam Leucine rich repeat 394 435 IPR001611 GO:0005515
Apr2g2069 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Apr2g2069 966 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Apr2g2069 966 Pfam Leucine rich repeat N-terminal domain 331 372 IPR013210 -
Apr2g2069 966 PANTHER OSJNBA0070M12.3 PROTEIN 8 966 - -
Apr2g2069 966 SUPERFAMILY L domain-like 26 309 - -
Apr2g2069 966 MobiDBLite consensus disorder prediction 488 507 - -
Apr2g2069 966 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Apr2g2069 966 Pfam Protein tyrosine and serine/threonine kinase 621 893 IPR001245 GO:0004672|GO:0006468
Apr2g2069 966 SMART serkin_6 618 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2069 966 Gene3D Transferase(Phosphotransferase) domain 1 696 911 - -
Apr2g2069 966 MobiDBLite consensus disorder prediction 461 487 - -
Apr2g2069 966 CDD STKc_IRAK 624 894 - -
Apr2g2069 966 SUPERFAMILY L domain-like 331 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2069 Apr-Chr2 26017327 26021340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2069 84 887 Receptor kinase-like Gene Family AT1G55610 30.715 4.44e-82 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Apr2g2069 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2069 - - gmx:100785090 1549.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2069 2 26017327 26021340 Apr2g2069 2 26017327 26021340 ECH