Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2063 ATGGGATTTTTGTTGAAAGAAGCTTTGAAGACTCTGTGCGGTCGGAATCAGTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCCACAATTCCAAGCTATTAATCTGGGAAGAATGCTACTATGAACCCTTGCCGTGCTCTATCCCATCACGCATTCTTGGGAGGTCTGATTTGCCTCACCTGAATGGGGAAGGATGCTGGTTTTCTTCGGAGTCTCAGTCATCTCATCTAGGGATTCAAGAGGAGGACAGAGTCAGTTCTCTGATTAACAAAATGACAGTAAATAATTCAGTCATTGTTGCAGGTGAAGGTATAATTGGACGGGCTGCATTTACAGGCAACCATCAGTGGATTCTTTTGAACAATTTCACTAAAGATGTATATCCACAAGAGGTATATGCTGAGGTGCATCACCAATTTTCATCTGGAATTCAGACAGTAGCAGTTATACCTGTGCTTCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCTATAATGGAGAATATGGGATTTGTGAATGATGTGAAAAGCTTGATCCTGCATTTGGGATGTATCCCTGGTGCCCTGCTATCTGAAGACTATTCAGCAAAAACTGCCACTGCTGGTGTGCATGTGTCTGTTGATCCACCAGTCATTTCCTCAAACTGCACTCCCTTGGTAGCAAATGGCTTCAATCAGCAGAGTAATTTATCTAATGCTTCAAGGCCTTTTGTTCAAACACCATGTCCTCTAAAGGAAGAGATAAATACTTGCCAGGGTTCTGTATTGACACCCCAAAACCATAGCTTGAGCCGTATATCCAATAATGTTTGCCAACCAAAAGTTATTCAAATGAGTAACACGAGGTTTTCTGGCCAACAAGAGAATAGAGTCGCAGAGGCAAAAGTTATACCCTCAAATCATGATTCATGCCTACGACAGTGTTCTGTTCCTTATAATGCTAGATCTGTATTTAGTAACTTACCTGGTTCTGGGTCTTTTGGCCAATCTGGTCTAAGTGAGCATAGTCTAAAATATATGGAACAACAAATCACGGCAGCAATGGGGAATCGAGATAATGTTAATCCTTGTATAAATGTGTCAAGTACCTCAGACATGTCTCAACCAAAAACAGGTGGAGGCCATATAGTTGGCCACAATCTGAATTCTGTCGGTATTTCTTTACTTGGAGGAATCCCAATATATGATGGGTTGAGTACTCTTTTGAGGACAAATATGATTGATTCTTCTGGTTCAAAGTCTTCCAAAGTATACATAGCTGATTCATCTAGAGTAAAAGAAGTTGGGATTGGACTTCAAATTGATGATTCAACTAATGCAAGGGGTTATTCTCCAGTTAATTTGACTAGTCAGTCAGGTGTCTTTTCCATGCCTGTAGAAGGTTCTGATAGGAAGATTCTCCCTGTAGGTTTAAAGTGTGCTTCAACAGATCAAAAGATAGATTATGATTCGCTTCAGCCCCCTAGCATTCCCACATTTCATGTTGAGGAGCATGCACCTATTAGTGCTCAAATCCCTGGTTTTGCCCACGATTGCCTTCATAAAGATGGTAGTAATCAATCTGTGATGGCAATGAATCCTAAACACAAACTAGCTTGTGCTGGACCTCCATTAGGTGATGACCTGTTTGATGTGTTAGGGGTGGATTTTAAAAACAAACTGCTGAATGGAAATTGGAATAAACTGTTTGCTCATGAATCAGATGCAAATGCAGAAAATATGGATAAAAAGGTCGCACCTACAAATATGCATGGTACACATCCTGATGTTTATTCAGTTAAAGAAGCAATATCAGACAGCGGTGTCTTTTCTGAGATGGGAACAGACCACCTCTTGGATGCTGTGGTCTCAAAGGCCAAATCTGTTGTGAAACAGGATTCTGATGACATGTCTTGCAGGACAACATTGACTAGGAATAGTACCGCCTCTGTTCCCTCCCTTGCGTGCAAGCAGTTTAAGTCTGGTCATTACCCAGGGGGATTGTTTGATTTTCCTAAGAATGGTGGTAAAATGGGTGCCACAGAAACTAGTTTTCTTAGGTCCGGATGTAGCAAGGATGATACTGGAAACAGTTCTCAAACTACTACTGTTTATGGGTCTCAACTTAGTTCGTGGGTTGAAAATAGTGGCAATGTGAAGCGTGAAAGTAGTGTTTCAACTGGATACTCAAAGCGACCAGATGAAGCTTGCAAATCAAATCGTAAAAGGCTTAAACCAGGAGAGAATCCCAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTACGCGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTTTGGAACGGACCATTAAACATATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGTTGAAACAAACAGGAGAGTCTAAGATTATTAATAAGGATGGTGGGATGCTTTTGAAAGACAACTTTGAGGGAGGGGCTACATGGGCATATGAAGTTGGTTCACAATCAATGGTTTGTCCTATTATAGTCGAAGATCTGAATTCTCCTCGTCAAATGCTAGTGGAGATGCTATGTGAAGAACGCGGTTTATTTCTGGAAATAGCTGATTTAATCAGAGGGTTAGGTTTAACCATCTTGAAGGGGGTAATGGAAGCTCACAATGACAAAATATGGGCACGTTTTGCTGTTGAGGCAAACCGGGATGTAACAAGGATGGAAATATTTATGTCACTTGTTCGTCTTTTGGAGCAAACGGTGAAGGGGAATGCATCTTCATCCAATGCAATTGATAACATGATGGTTTATCACTCTCTCCCACAGGCTACACAGATACCAGCAACTGGAAAGTCTAGTAGTCTGCAATGA 2853 0.4136 MGFLLKEALKTLCGRNQWSYAVFWKIGCHNSKLLIWEECYYEPLPCSIPSRILGRSDLPHLNGEGCWFSSESQSSHLGIQEEDRVSSLINKMTVNNSVIVAGEGIIGRAAFTGNHQWILLNNFTKDVYPQEVYAEVHHQFSSGIQTVAVIPVLPHGVVQLGSFLPIMENMGFVNDVKSLILHLGCIPGALLSEDYSAKTATAGVHVSVDPPVISSNCTPLVANGFNQQSNLSNASRPFVQTPCPLKEEINTCQGSVLTPQNHSLSRISNNVCQPKVIQMSNTRFSGQQENRVAEAKVIPSNHDSCLRQCSVPYNARSVFSNLPGSGSFGQSGLSEHSLKYMEQQITAAMGNRDNVNPCINVSSTSDMSQPKTGGGHIVGHNLNSVGISLLGGIPIYDGLSTLLRTNMIDSSGSKSSKVYIADSSRVKEVGIGLQIDDSTNARGYSPVNLTSQSGVFSMPVEGSDRKILPVGLKCASTDQKIDYDSLQPPSIPTFHVEEHAPISAQIPGFAHDCLHKDGSNQSVMAMNPKHKLACAGPPLGDDLFDVLGVDFKNKLLNGNWNKLFAHESDANAENMDKKVAPTNMHGTHPDVYSVKEAISDSGVFSEMGTDHLLDAVVSKAKSVVKQDSDDMSCRTTLTRNSTASVPSLACKQFKSGHYPGGLFDFPKNGGKMGATETSFLRSGCSKDDTGNSSQTTTVYGSQLSSWVENSGNVKRESSVSTGYSKRPDEACKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKDGGMLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNSPRQMLVEMLCEERGLFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGNASSSNAIDNMMVYHSLPQATQIPATGKSSSLQ* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2063 950 MobiDBLite consensus disorder prediction 728 753 - -
Apr2g2063 950 CDD bHLH_AtLHW_like 742 812 - -
Apr2g2063 950 MobiDBLite consensus disorder prediction 710 724 - -
Apr2g2063 950 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 950 - -
Apr2g2063 950 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 738 787 IPR011598 GO:0046983
Apr2g2063 950 MobiDBLite consensus disorder prediction 710 753 - -
Apr2g2063 950 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 179 IPR025610 -
Apr2g2063 950 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 950 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2063 Apr-Chr2 25975960 25983514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2063 541 935 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.218 6.29e-118 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2063 - - gmx:100787748 1433.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2063 2 25975960 25983514 Apr2g2063 2 25975960 25983514 ECH
Apr2g2063 2 25975960 25983514 Apr3g1199 3 26527823 26534385 PCT