Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2056 ATGGATGTCGATTCCTCGATGGTGCCGGAGGCCGATCACGATCCGACCACACAGAACCACGCCGCCTCTGCTCCGGCGCCGGTTCCGACAGAGGGAGAGCAGCTGGCGGAGCCGCCGTCGTGCGGTGGCGGATCTCCGACGCAGCCGCCGGTGCAGCAACAGCAGGCGTCTGCTCCGGTGCAGCAGAGTCCGGTGGTTGGGCCCAGGCTGGCGCCAACATACACTGTGGTGAATGCAATTTTGGAGAAGAAAGAGGACGGCCCGGGGCCGAGGTGTGGCCACACGTTGACGGCGGTGGCGGCTGTTGGAGAGGAGGGGACGCCTGGGTACATTGGTCCGAGGCTGATATTGTTCGGTGGTGCCACTGCTCTTGAAGGCAATTCTGCGGCTTCAGGGACTCCTTCGTCTGCTGGAAATGCTGGCATACGTTTAGCGGGTGCCACAGCTGATGTTCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTTGGAGAACCTCCAACTCCAAGAGCTGCTCATGTGGCAACTGCTGTGGGAACTATGGTGGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAATGGCCACGCTGGCATAGAGTGTCTGTTCAGGGCCCTGGACCTGGGCCACGCTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTAATGGCAATTGGAGGCAATGATGGAAAGAGGCCTTTGGCGGATGTATGGGCCTTGGACACAGCTGCTAAGCCTTATGAATGGCGAAAGTTAGAACCAGAAGGAGAGGGACCACCTCCATGCATGTATGCAACTGCAAGTGCACGCTCCGATGGGCTTCTTCTACTTTGTGGAGGGAGAGATGCTAATAGTGTTCCATTGGCAAGTGCATATGGACTTGCTAAACATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCAGGTGTCTCACCATCACCCAGATATCAGCATGCAGCGGTGTTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCACTTGGTGGAGGACGGATGGTTGAAGACTCATCGAGTGTTGCAGTATTGGACACTGCTGCCGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACTGGTAGATACAGTGCTGATGCTGCAGGAGGAGATGCTGCAGTTGAGTTGACTAGGCGTTGTAGGCATGCAGCTGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGGGGGGGAGTCTTGTTGGACGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAGCTGCTGCTTCACATGCTGCTGCAGCAGCTGCTGCATCGAATGTACAAGCAGGACGCTTACCTGGACGATATGGATTTGTTGATGATACCACGAGGCAAACAATGCCTGAAGCAGCTGCTGATGGGTCTGTTGTTTTGGGAAATCCAGTTGCACCCCCAATGAATGGAGACATCTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGACCTCGGAGAACTGCCAAAGGAGTCGAGTATCTGGTTGAAGCATCTGCTGCAGAAGCTGAAGCTATCAGTGCTGCACTAGCTGCTGCCAAGGCACGACAAGAAAATGGAGAAGTTGAATTACCTGACAGAGACCGTGGGGCTGAGGCTACCCCAAGCGGGAAACAAACATCTTCCTTGATTAAACCCGATTCTGCAGGCTCAAATAACATCACTCCTGGTGGTGTTAGGCTGCATCATAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATAGATCAATTTGAAAATGAAGGCAGGCGGGTCAGTTATGGGACTCCAGAAAATGCAACTGCTGCCAGGAAATTATTAGATCGGCAAATGTCTATCAATAGTGTGCCGAAAAAGGTCATTGCACACCTCTTAAAACCTCGTGGATGGAAACCACCAGTACGCCGGCAATTTTTCTTAGATTGTAATGAAATTGCTGATCTTTGTGATAGTGCTGAGCGGATATTTTCAAGTGAACCAAGTGTCTTACAACTTAGGGCACCAATTAAAATATTTGGTGATCTACATGGACAGTTTGGTGATCTCATGCGTCTTTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGGGGACAGCACAGCTTAGAAACTATCACCCTTCTTCTTGCTCTGAAGGTTGAGTATCCCAACAATGTGCATTTAATACGTGGAAACCATGAAGCTGCCGATATCAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGACATGGCATCGGATAAACAGGCTGTTTAATTGGCTTCCTCTAGCAGCGCTAATTGAGAAAAAAATTATTTGCATGCATGGAGGTATTGGCCGTTCGATAAATCATGTGGAACAGATTGAAAACATTCAGCGTCCAATACCAATGGAAGCAGGATCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGACTGCGACCCAATGCTAGAGGTCCTGGATTAGTTACTTTTGGGCCTGACCGGGTCATGGAATTTTGCAACAACAATGATCTTCAGCTGATCGTTCGTGCACATGAATGCGTGATGGATGGGTTTGAGCGTTTTGCCCAGGGACATCTGATCACACTCTTCTCGGCTACAAATTACTGTGGTACGGCAAATAATGCTGGAGCAATATTAGTTTTGGGTAGAGACCTTGTAGTGGTTCCTAAACTAATTCATCCATTACCACCTGCAATTTCTTCACCAGAAACATCACCTGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAATAGACCACCAACACCAACTAGAGGCCGTCCTCCAGTAACGAACGACCGAGGTTCACTCGCTTGGATATAG 3018 0.4914 MDVDSSMVPEADHDPTTQNHAASAPAPVPTEGEQLAEPPSCGGGSPTQPPVQQQQASAPVQQSPVVGPRLAPTYTVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAAASNVQAGRLPGRYGFVDDTTRQTMPEAAADGSVVLGNPVAPPMNGDIYTDISTENAMLQGPRRTAKGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGKQTSSLIKPDSAGSNNITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPPVTNDRGSLAWI* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2056 1005 ProSitePatterns Serine/threonine specific protein phosphatases signature. 771 776 IPR006186 GO:0016787
Apr2g2056 1005 Gene3D - 638 976 IPR029052 -
Apr2g2056 1005 MobiDBLite consensus disorder prediction 1 67 - -
Apr2g2056 1005 Pfam Kelch motif 332 378 IPR011498 GO:0005515
Apr2g2056 1005 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1005 - -
Apr2g2056 1005 Pfam Galactose oxidase, central domain 226 279 - -
Apr2g2056 1005 Gene3D - 198 451 IPR015915 GO:0005515
Apr2g2056 1005 PIRSF STPPP_BSU1 40 1005 IPR012391 GO:0004721|GO:0009742
Apr2g2056 1005 Pfam Calcineurin-like phosphoesterase 702 909 IPR004843 GO:0016787
Apr2g2056 1005 PRINTS Serine/threonine phosphatase family signature 702 729 IPR006186 GO:0016787
Apr2g2056 1005 PRINTS Serine/threonine phosphatase family signature 737 764 IPR006186 GO:0016787
Apr2g2056 1005 PRINTS Serine/threonine phosphatase family signature 770 794 IPR006186 GO:0016787
Apr2g2056 1005 PRINTS Serine/threonine phosphatase family signature 808 834 IPR006186 GO:0016787
Apr2g2056 1005 PRINTS Serine/threonine phosphatase family signature 898 918 IPR006186 GO:0016787
Apr2g2056 1005 PRINTS Serine/threonine phosphatase family signature 920 936 IPR006186 GO:0016787
Apr2g2056 1005 MobiDBLite consensus disorder prediction 46 62 - -
Apr2g2056 1005 MobiDBLite consensus disorder prediction 565 586 - -
Apr2g2056 1005 MobiDBLite consensus disorder prediction 548 588 - -
Apr2g2056 1005 MobiDBLite consensus disorder prediction 550 564 - -
Apr2g2056 1005 Gene3D - 72 197 IPR015915 GO:0005515
Apr2g2056 1005 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1005 - -
Apr2g2056 1005 CDD MPP_Bsu1_C 654 956 IPR041758 -
Apr2g2056 1005 MobiDBLite consensus disorder prediction 981 1005 - -
Apr2g2056 1005 SUPERFAMILY Metallo-dependent phosphatases 659 965 IPR029052 -
Apr2g2056 1005 SUPERFAMILY Kelch motif 146 435 IPR015915 GO:0005515
Apr2g2056 1005 SMART pp2a_7 674 958 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2056 Apr-Chr2 25877591 25889826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2056 666 901 Calmodulin-binding Proteins AT5G63870 29.412 4.46e-27 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2056 2 25877591 25889826 Apr2g2056 2 25877591 25889826 ECH
Apr2g2056 2 25877591 25889826 Apr3g1192 3 26408436 26422621 ECH
Apr2g2056 2 25877591 25889826 Apr3g1192 3 26408436 26422621 PCT