Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2049 ATGGATCCCTTGATCCACAAGCTCCGGCGCCACCTTCTCGCGTGGCTCCACCGATCTCGTTCTGGTAATCGTTCTGGTGCGGTGTTCTTTGTGAGGAGAATTTCGTATAAGGATGTTAGAAGGGCTACGGAAGGTTTCCATAGAATAGTTTATAACAATTCTGAAGTTTTAGCCTATGCTGCTAAGTTTGGGGATGGTGAAGGTGTTTGTTTGGTGAAAGAATTGAGAGATTTTGAGGAAGGAAGTGAGAATTTCTACAGACAAGTGCAGTTGTTGGGGCGCTTGCGTCATCGCCACCTCCTCTCGCTCAAAGGCTTTTCTGTGGGACACAATCACAAGAGACTACTCATATTTGACAACGTAGAAAATGGAAGCTTAAAGGAGCATCTCAATGACCCTTTGAAGACTCCCTTAAATTGGAGGACGAGGTTACAAATAGCTAATGGTGTTGTGGCAGCACTGGAATATTTGTTTCTCTTCAGTGAGCCACCAATATATCATGTCTCTATCAGTTCAAGCAATATTATGTTAGATGAGAACTTCACCGCCAAACTATCCGATTTTGGTCTTCTTACATCTGGGGATAATTCTATTATGAAGCCATATTCAGAAGATTGCATGAAGCAGAAAAGTTGTAAGATTATATTCCAACTTGGAGTGCTCATATTGGAACTGGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCTGATTTAATTGAATGGATCCAAGAATCTCGATTTTACAATTCCATAGATAAGATGATAGACCCGGATCTTGGAAACCATTATGACTGTACCGAGCTTAAAAGTCTTCTAGCTGTGGCAAAATTATGTATCAAATCAAAGGACAAGCCTTCATTTACAATGCCTCAGTTATTCCGGTATCTCCAAAAGAAGATTGATATTCCCCATCACTAG 918 0.4129 MDPLIHKLRRHLLAWLHRSRSGNRSGAVFFVRRISYKDVRRATEGFHRIVYNNSEVLAYAAKFGDGEGVCLVKELRDFEEGSENFYRQVQLLGRLRHRHLLSLKGFSVGHNHKRLLIFDNVENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPIYHVSISSSNIMLDENFTAKLSDFGLLTSGDNSIMKPYSEDCMKQKSCKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYNSIDKMIDPDLGNHYDCTELKSLLAVAKLCIKSKDKPSFTMPQLFRYLQKKIDIPHH* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2049 305 Gene3D Transferase(Phosphotransferase) domain 1 121 213 - -
Apr2g2049 305 Gene3D Transferase(Phosphotransferase) domain 1 215 302 - -
Apr2g2049 305 ProSiteProfiles Protein kinase domain profile. 36 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2049 305 PANTHER OS01G0253100 PROTEIN 1 301 IPR045271 GO:0004714|GO:0006468
Apr2g2049 305 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 301 - -
Apr2g2049 305 Pfam Protein tyrosine and serine/threonine kinase 69 194 IPR001245 GO:0004672|GO:0006468
Apr2g2049 305 Gene3D Phosphorylase Kinase; domain 1 15 119 - -
Apr2g2049 305 SUPERFAMILY Protein kinase-like (PK-like) 28 272 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2049 Apr-Chr2 25813913 25817063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2049 18 304 Receptor kinase-like Gene Family AT3G19300 36.452 1.95e-53 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Apr2g2049 PK_Tyr_Ser-Thr 8.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2049 - - aprc:113853565 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2049 2 25813913 25817063 Apr2g2049 2 25813913 25817063 ECH