Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2002 ATGGAGCCCAGTTGCCCTATTTGGTCGCGCTGTGCCACTGAAATCTCTGCTCTTCTCGCCCCTCCTTCCCCTCTTCAACTTCAGGAATATTATCACAACCTTTTGTCCGCAAGGCAGTGCAGTGGTATCATAGTCAAACAGGATGACAATGTTGGAAAAGGTTTATATGCTGCCGCGGACTTCAAAGAGGGGGAACTGGTTCTGAAGGACCAAATGCTTGTGGGGGTTCAACACTCGCTCAACAAGATTGATTGTTTGGTCTGTAGCTTCTGCTTTCGTTTTATTGGTTCCATAGAACATCAAATTGGAAGAAGGCTTTACTTGCAACAGTTAAGTGCCAATGAGAGTCATGGCTCTGATGTGGGAAACTCTGGCTCTTCAAAACACTGGCACGAAGTGGATTCCTCTGATGAAGAGGAGAGCACTCAGCAATGTACTTCTGGTAGTTCCAAAACTAAAGTTCCTCTCCCTGAAGGTGTTGTGGAATCATTAATGAATGGCAAATTAAGGTTGCCTTGCTCTGAGAAGTTCTCCTTGCCGCCAGCTGTCCCATGCCCTGGTGGATGTGGAGAAGCTTATTATTGTAGCACCTCCTGTGCAGAGGCTGATTGGGAATCCTCCCATTCTTTACTCTGTACTGGTGATAGTTGTGATCCAGAACATAGGGAAGCACTCCTTAAATTCATCAAACATGCTAATGAAACAAATGACATATTCCTCCTTACTGCAAAGGCTATTGCTTTTACCATATTAAAGTACCGCAAGTTAAAAGCAGTTAGTCTTGAAGAGCCAGCAAACTATGATACACCCTGTGTTTCAAGCCACTGCAATTTATCTCTTCTTTTGGAAGCTTGGAGACCTATATCAATGGGACACAAGAGAAGGTGGTGGGACTGTATTGCCTTGCCAGATGATGTTGATTCTTCTGATGAAGATTCATTCAGGATGCAAATAAAAGAGTTGGCATATGAGTCTCTCCAACTTCTTAAGTCAGCTATATTTGACAAGGAATGTGAGCCATTATTTTCCCTTGATATCTATGGACATATCATTGGCATGTTTGAGCTGAATAATCTTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGACATATCCTAACAAGGAAGAAGCTGAGAAGGTTACACAACCAATTCTGGGTGCTCTTGGTGAAGACTATTCTATTTGTTGCCAAGGAAGTGCATTTTTTCCTTTGCAAAGCTGCTTCAATCATTCCTGTTGTCCTAGTGCTAAAGCTTTCAAAAGAGATGAGGATAAAGATGGCCAAGCAACAATAATTGCACTGACGTCCATTTGTAAAGGAGAGGAGATAACCATCTCGTATGTTGATGAGGACCTTCCGTTTGAAGAGAGACAAGCATCACTTGCAGATTATGGTTTCAGATGCAGGTGTTCAAAGTGCATTGCAGAAGGGCCATAA 1461 0.4264 MEPSCPIWSRCATEISALLAPPSPLQLQEYYHNLLSARQCSGIIVKQDDNVGKGLYAAADFKEGELVLKDQMLVGVQHSLNKIDCLVCSFCFRFIGSIEHQIGRRLYLQQLSANESHGSDVGNSGSSKHWHEVDSSDEEESTQQCTSGSSKTKVPLPEGVVESLMNGKLRLPCSEKFSLPPAVPCPGGCGEAYYCSTSCAEADWESSHSLLCTGDSCDPEHREALLKFIKHANETNDIFLLTAKAIAFTILKYRKLKAVSLEEPANYDTPCVSSHCNLSLLLEAWRPISMGHKRRWWDCIALPDDVDSSDEDSFRMQIKELAYESLQLLKSAIFDKECEPLFSLDIYGHIIGMFELNNLDLVVASPVEDYFLYIDDLTYPNKEEAEKVTQPILGALGEDYSICCQGSAFFPLQSCFNHSCCPSAKAFKRDEDKDGQATIIALTSICKGEEITISYVDEDLPFEERQASLADYGFRCRCSKCIAEGP* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2002 486 Pfam MYND finger 184 212 IPR002893 -
Apr2g2002 486 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 484 IPR044237 GO:0008168
Apr2g2002 486 Pfam SET domain 392 455 IPR001214 GO:0005515
Apr2g2002 486 SUPERFAMILY SET domain 36 481 IPR046341 -
Apr2g2002 486 SUPERFAMILY HIT/MYND zinc finger-like 176 213 - -
Apr2g2002 486 MobiDBLite consensus disorder prediction 117 155 - -
Apr2g2002 486 Gene3D SET domain 381 485 IPR046341 -
Apr2g2002 486 CDD SET_SMYD 395 481 - -
Apr2g2002 486 Gene3D - 141 214 - -
Apr2g2002 486 ProSiteProfiles SET domain profile. 41 456 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr2g2002 SET 4.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2002 - - gmx:100803651 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2002 2 25364888 25371904 Apr2g2002 2 25364888 25371904 ECH