Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1995 ATGTCTTCCTCAAAGCACATTTCCTTTATTCTCTTCTCATTCACTTCGGCTTTCCTTCTCCAAACATGTCTCGGAGCCTATGCTCCTCTCCTCCATTTATGTTCAAACTCTCAAAACTTCACACCCTCTAGTCCCTATGAAGCAAATTTGAAAACTCTCATTAACTCGCTTATCTACAAGACACCTTCAACAGGTTTTGGGGTAGGCTCAGTGGGCCAATACCAAAACCAAAAAGCCTATGGGCTTGCTCTTTGCCGTGGTGACGTGTCAGCCTCAGAATGCAAAACTTGTGTCTCTGAGGCAACCAAAGAAATTCTCACTAGTTGCCCATACAACAAAGGTGGAATCATATGGTACGATTATTGCATGTTCAAGTACTTAGACACTGATTTCTTTGGCAACATTGACAACACAAACAACTTCTCTATGTTGAACGTGCAAAACGTGAGTGACCCTTTAATGTTTAACTACATGACCAAGGAATTGTTGAGCCTTCTTGCCCATAAAGCTTCTGTGAGCACTAAAATGTATTCAACAGGAGATCTAAAGGTTGGTGGAGAATCACAGAAAATTTATGGGTTAACTCAGTGCACTAGAGACCTTTCTAGTGGCGATTGTAAGAAGTGTCTTGAAGATGCAATTAACGAGCTTCCAAGTTGTTGTGATGGAAAACAAGGAGGCAGAGTTGTAGGTGGAAGCTGCAACGTTCGATATGAGATATATCCATTTGTGAAAGAGTAG 741 0.4143 MSSSKHISFILFSFTSAFLLQTCLGAYAPLLHLCSNSQNFTPSSPYEANLKTLINSLIYKTPSTGFGVGSVGQYQNQKAYGLALCRGDVSASECKTCVSEATKEILTSCPYNKGGIIWYDYCMFKYLDTDFFGNIDNTNNFSMLNVQNVSDPLMFNYMTKELLSLLAHKASVSTKMYSTGDLKVGGESQKIYGLTQCTRDLSSGDCKKCLEDAINELPSCCDGKQGGRVVGGSCNVRYEIYPFVKE* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1995 246 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Apr2g1995 246 PANTHER DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATED 2 245 - -
Apr2g1995 246 Pfam Salt stress response/antifungal 150 240 IPR002902 -
Apr2g1995 246 Pfam Salt stress response/antifungal 34 126 IPR002902 -
Apr2g1995 246 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 2 245 - -
Apr2g1995 246 Gene3D - 28 131 IPR038408 -
Apr2g1995 246 Gene3D - 136 243 IPR038408 -
Apr2g1995 246 ProSiteProfiles Gnk2-homologous domain profile. 137 243 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1995 Apr-Chr2 25309794 25310599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1995 28 245 Pollen Coat Proteome AT4G20670 39.207 1.65e-49 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1995 - - gmx:100527155 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1995 2 25309794 25310599 Apr2g1995 2 25309794 25310599 ECH