Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1986 ATGAAAGCTGAGTTAAAGGGCACGTCCATTTCCTTTCAAAACCCTCCTCTCTTCAACACACCCCACAGTCCTCTTTCGGGAGCACTTAAAGGGTGTCTTGGAAGCCTTGATGGAGCTTGTATTGAGAAGCTATTGCTTCACTGTGCTAGTGCTTTGGAGAGCAACGACATCACCTTGGCTCAACAAGTTATGTGGGTACTCAACAACGTTGCTTCTCCTGTGGGTGACACTAACCAAAGACTCACCTCGTGGTTTCTAAGGGCACTAATCTCTAGGGCTTCAAGAATTTGCCCCACGGCCATGAGTTTCAAAGGAAGCAACACCATTCAAAGGAGGTTGATGACAGTGACTGAGCTAGCCGGGTATGTGGATCTAATTCCTTGGCATAGGTTTGGATTTTGTGCATCCAATAATGAAATTTTCAAAGCTATAATGGGGTTCCAAAGGGTACATATTCTAGATTTTAGCATAACACATTGTATGCAATGGCCTACTTTTATAGATGCATTAGCTAAAAGGCCTGAAGGACCCCCTTCACTTAGAATCACTGTACCATCTTGTAGGCCACCGGTCCCTCCTTTGGTCAATATATCAATGCATGAGGTTGGCCTACGTTTAGGGAATTTTGCCAAGTTTAGGGATGTCCCTTTTGAATTTAATGTCATAGGAAATACAGGACCCTTAACATCTACGGAATTCAGTAACGAAATTGAAACAAGCAGCTTAAATTTTGAATCAATGTTAAGCCTCTTGAATCCTACCATGCTAAACCTTAGGGAAGATGAAGCTTTGGTCATAAATTGCCAAAATTGGCTACGCTATTTGTCTGATGATAGAAAAGGAAGCAGCCAAAATCTTTCCCTAAGGGATGCTTTTCTGAATCTAGTTAAAGGACTTAACCCCCAAATTGTGCTCTTGGTTGATGAGGATTGTGATCTCAGTGCATCTAGTCTCACATCAAGAATTACCACATGTTTCAACCATTTGTGGATACCCTTTGATGCCCTTGAGACCTTTTTGCCTAAAGATAGTTGTCAGAGGACAGAGTTTGAATGTGACATAGGCCAGAAAATTGAGAACATCATCAGCTTCGAAGGGCATCAAAGAATAGAGAGGTTGGAGTCTGGGATGCAAATGTCCCAAAGAATGAAAAATGTAGGTTACTTCAATGTTCCATTTTGTGATGAAACTGTTAAGGAAGTTAAAGCTTTGCTAGATGAGCATGCCAGTGGATGGGGGATGAAGAGGGAAGAAAATATGTTAGTTCTCACATGGAAAGGAAACAGCTGTGTGTTTGCGACAGCTTGGGTCCCTTGTGAAATGAGGGATCATGTTGGTATGGATGTAAGTATGTCGTAA 1359 0.4202 MKAELKGTSISFQNPPLFNTPHSPLSGALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRICPTAMSFKGSNTIQRRLMTVTELAGYVDLIPWHRFGFCASNNEIFKAIMGFQRVHILDFSITHCMQWPTFIDALAKRPEGPPSLRITVPSCRPPVPPLVNISMHEVGLRLGNFAKFRDVPFEFNVIGNTGPLTSTEFSNEIETSSLNFESMLSLLNPTMLNLREDEALVINCQNWLRYLSDDRKGSSQNLSLRDAFLNLVKGLNPQIVLLVDEDCDLSASSLTSRITTCFNHLWIPFDALETFLPKDSCQRTEFECDIGQKIENIISFEGHQRIERLESGMQMSQRMKNVGYFNVPFCDETVKEVKALLDEHASGWGMKREENMLVLTWKGNSCVFATAWVPCEMRDHVGMDVSMS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1986 452 Pfam GRAS domain family 42 436 IPR005202 -
Apr2g1986 452 ProSiteProfiles GRAS family profile. 32 437 IPR005202 -
Apr2g1986 452 PANTHER OS05G0500600 PROTEIN 2 438 - -
Apr2g1986 452 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 438 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1986 Apr-Chr2 25257276 25258634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1986 8 439 GRAS Transcription Factor Family AT3G49950 44.218 7.54e-119 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr2g1986 GRAS 1.6e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1986 - - gmx:100805056 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1986 2 25257276 25258634 Apr2g1986 2 25257276 25258634 ECH