Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1979 ATGAGAACCACCCACGCTGCGTTTTCCCTCCTTTGTTGGTTGCTGTGCTCCCAATCATGTTCAGCAACAGATACTTTGAATCAAGGGGAGAAGATAACTCAGGAGTTGGGGAACCTCGTTTCAGCTGAAAGCACTTTTGAATTGGGCTTCTTTTCATTTCCGGATGATGAGCGTGGTAGAAAATACTTGGGGATATGGTATTGGAACTTGGAACCACGAACAGCGGTATGGGTTGCAAACAGAGACAAGCCTGTGGAAGATTCCAGCGCAGTTTTTCAAATTGCAAGGGATGGAAATCTGGTAATAGCAGGTGCATCACAAAGCTATTGGTCTTCTGGACTCAATGGGTCCTCCTCGTCCACAACCTCAAACAGAACCGTGAAGCTCCTAGATTCTGGGAATTTAGTGTTAATGAATAATAATAATAATAACTTGTGGCAGAGCTTTCAACACCCAACAGACACGTTTCTTCCGGGCATGAAAATGGACGCAAATTTTACGTTGACTTCTGGAAGAAGCGCCGTTGACCCCGGAAGTGGGAGCTTCTCCCTTAAGTTGGTTCAAACGGGGAACGATGCAAAAATCGTTGTAAATAACCATTCACAACTTTATTGGACACTTGATGAACGGGATTCAGAAGCGACGTCAATTTATAACTTCTTGGCGTTTGTCAACGCCACCAACTCTTATGCTTCACGCCCCAGTCCATTCATCAATATATCGCATCCGCAACTGCAACCTCGTGATTTTGATAAATCGAGGCTGGTAATGAATTTCACGGGGGAGGTAAATTTTCTGAAATGGGAAGAAGACGTAGAGAAGAAGTGGGATCGACGATGGTGGTGGCCACATGACGACTGTGACAAACACAATTTTTGCGGCTACTTTAGCAGCTGCAACAAAAATAATTGGCAGCGCTGCAAATGCTTGCCAGGATTCCATCGCGGGATGTCGGATAATCAGCAGCATCATGGAGATTTCCATCTCCCAGGGTGTGTCAGAAAATCAAAGTCGTGTACCAACGAGAACATGATGTTCCTCAACTTAACCAAGATAAAGGTGGGCAAGCCAGATCTACGGAACCGCACAGAAACAGAAGAAAAATGCCAATCCTTGTGCCTTAACATGTGTTATGACTCCCACATCCAGTGCCAGGCTTATTCATATAATATCTCTGCAACTTCATATAATCGTGGTTCCGATCCCAATCTGTGCGAAATCTGGACACGGGATTTACCCAGTCTTCAAGAGGACGACGATAGTATTACCGGTCGTTATCTTTCTATCCTAGTCAAGAGCTCAGACATAGCACCAACTGCGAAATCGTGTGAACCTTGTGGCACATATACAATTCCTTATCCGCTAAGCACTGGGCCAACCTGTGGAGACCCTGCGTACTACAAGTTCAATTGTCACGAAGGCCAGGTTAGTTTCATGATGCCCGGAGGAAAACATTACCGAGTTACTTGGATCGATGTAGATACCAGAAAGTTTTACATTCAAACGGATGATTCGAATCACTGTGATCAAGCTTCCATCAATCAAAATGATTCGCCTAATTTTCCATTTAGTGTGACTAATTGGTGCTTTAAAGATGATGAAATAGAGATCAGTTGGCAATCAGCACAAGAACCGCCCTGTAGTAACCCTATAGACTGCAAGCTGTTGTCACATTCAACATGTAGGCCAACAAATACAGGAGACACAAGGTGCCTTTGCGATTTAAACTATAACTGGAATGCCACAATTTTTAATTGTACTAAAGAAGAGTCATCAGAAAACCATTCAACTCACCGACTGGCTTTGATTCTTACTACAATTCTTATTGGCATGACTATTCTGGCAAGCATAATAGTGTTTGTCATTGTGCGGAGAAGGAAAACAGCCCCTAATATGCCTGATGTGACAAGCACTCGGATTCAGGAGAGCTTGTACGATAGTGAAAGACATGTGAAAGGATTAATTGGCTTAGGAAGCTTAGAAGAAAAAGACGTTGAAGGCATTGAAGTACCCTGCTATACTTTTGCAAGCATTCTAGCTGCTACAGATAATTTCTCAGATTCAAACAAGCTTGGACAAGGAGGTTATGGGCCTGTCTATAAGGGAACGTTTCCTAGTGGTCAAGATATAGCTGTAAAGAGGCTTTCAAGTGTTTCCACTCAAGGATTACAAGAATTCAAAAATGAGGTTGTTCTGATTGCCAAACTTCAACATCGGAACCTTGTTAGAGTTAGGGGCTATTGCATAAAAGGAGATGAAAAGGTCTTGCTTTATGAGTACATGCCAAACAAGAGTTTGGACTCTTTCATATTTGACCGGACAAGAACTTTGCTCCTAGATTGGCCTATGCGATTTGACATAATTGTAGGCATTGCTCGAGGGTTGTTGTATCTTCACCAAGACTCCAGATTGAGAGTGATTCACAGAGACCTGAAAACAAGCAACATTCTTCTAGATGAGGATATGAATCCGAAGATATCAGACTTTGGCCTTGCCAAAATATTTGGGGGAAAAGAAACGGAAGCTAGTACAGAAAGAGTAGTCGGAACCTATGGATATATGGCTCCAGAATATGCCTTGGATGGTTATTTTTCGATCAAATCTGATGTGTTCAGCTTTGGAGTAGTCGTACTAGAAATTCTTAGCGGAAAAAAAAACACGGGATTCTATCAGTCCAAACAAATTTCTAGTCTTTTGGGTTATGCATGGAAGCTATGGACAGAGAATAAGCTGTTTGATTTAATGGAGCCATGTTTGGGTGAAACTTGCAACGAAAATCAATTGATTAAGTGTGCACTTGTTGGGCTCTTATGCGTACAAGATGAACCAGGTGATCGACCCACTATGTCAAATGTTTTGACAATGCTTGATAGTGAGATTGCAACCATCCCTGTTCCCACACAACCAACCTTTTTCGTCAACAAGCGTTTTTCTAGCTCAGCTTCTTCTTCTAGCAAACCAGAAATAAGTCTGCAATTTGAGAGCAGTTATCAAGAAGGTCGATAG 3006 0.4248 MRTTHAAFSLLCWLLCSQSCSATDTLNQGEKITQELGNLVSAESTFELGFFSFPDDERGRKYLGIWYWNLEPRTAVWVANRDKPVEDSSAVFQIARDGNLVIAGASQSYWSSGLNGSSSSTTSNRTVKLLDSGNLVLMNNNNNNLWQSFQHPTDTFLPGMKMDANFTLTSGRSAVDPGSGSFSLKLVQTGNDAKIVVNNHSQLYWTLDERDSEATSIYNFLAFVNATNSYASRPSPFINISHPQLQPRDFDKSRLVMNFTGEVNFLKWEEDVEKKWDRRWWWPHDDCDKHNFCGYFSSCNKNNWQRCKCLPGFHRGMSDNQQHHGDFHLPGCVRKSKSCTNENMMFLNLTKIKVGKPDLRNRTETEEKCQSLCLNMCYDSHIQCQAYSYNISATSYNRGSDPNLCEIWTRDLPSLQEDDDSITGRYLSILVKSSDIAPTAKSCEPCGTYTIPYPLSTGPTCGDPAYYKFNCHEGQVSFMMPGGKHYRVTWIDVDTRKFYIQTDDSNHCDQASINQNDSPNFPFSVTNWCFKDDEIEISWQSAQEPPCSNPIDCKLLSHSTCRPTNTGDTRCLCDLNYNWNATIFNCTKEESSENHSTHRLALILTTILIGMTILASIIVFVIVRRRKTAPNMPDVTSTRIQESLYDSERHVKGLIGLGSLEEKDVEGIEVPCYTFASILAATDNFSDSNKLGQGGYGPVYKGTFPSGQDIAVKRLSSVSTQGLQEFKNEVVLIAKLQHRNLVRVRGYCIKGDEKVLLYEYMPNKSLDSFIFDRTRTLLLDWPMRFDIIVGIARGLLYLHQDSRLRVIHRDLKTSNILLDEDMNPKISDFGLAKIFGGKETEASTERVVGTYGYMAPEYALDGYFSIKSDVFSFGVVVLEILSGKKNTGFYQSKQISSLLGYAWKLWTENKLFDLMEPCLGETCNENQLIKCALVGLLCVQDEPGDRPTMSNVLTMLDSEIATIPVPTQPTFFVNKRFSSSASSSSKPEISLQFESSYQEGR* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1979 1001 Pfam Protein kinase domain 686 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1979 1001 SUPERFAMILY Protein kinase-like (PK-like) 670 990 IPR011009 -
Apr2g1979 1001 CDD STKc_IRAK 691 957 - -
Apr2g1979 1001 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 15 999 - -
Apr2g1979 1001 MobiDBLite consensus disorder prediction 979 1001 - -
Apr2g1979 1001 SMART blect_4 23 152 IPR001480 -
Apr2g1979 1001 CDD B_lectin 39 152 IPR001480 -
Apr2g1979 1001 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 172 IPR036426 -
Apr2g1979 1001 Gene3D - 17 150 IPR036426 -
Apr2g1979 1001 Gene3D Transferase(Phosphotransferase) domain 1 761 963 - -
Apr2g1979 1001 Pfam S-locus glycoprotein domain 248 315 IPR000858 GO:0048544
Apr2g1979 1001 SMART serkin_6 685 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1979 1001 Pfam D-mannose binding lectin 74 167 IPR001480 -
Apr2g1979 1001 Gene3D Phosphorylase Kinase; domain 1 659 760 - -
Apr2g1979 1001 ProSiteProfiles Protein kinase domain profile. 685 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1979 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Apr2g1979 1001 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 999 - -
Apr2g1979 1001 ProSiteProfiles Bulb-type lectin domain profile. 23 150 IPR001480 -
Apr2g1979 1001 ProSiteProfiles PAN/Apple domain profile. 339 431 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1979 Apr-Chr2 25186065 25192040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1979 675 976 Receptor kinase-like Gene Family AT4G23140 57.468 4.78e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g1979 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1979 - - gmx:100807185 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1979 2 25186065 25192040 Apr2g1979 2 25186065 25192040 ECH
Apr2g1979 2 25186065 25192040 Apr3g1120 3 25770406 25775131 PCT