Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1976 ATGATTTCATTGTCTGCTCCACTTCCATCCAAATCAAAGTACATTTTTTATTTACTTTCTCCCAGGAAGATTTTCAGTGGTGACAGAGGCAAAGCCATAGCCACGTACAATATGAAGAACCCACGGTTCTTCTACCTTTCTCGTTTCACTCTCTTCTTCTTCTTCTTCTTCTTCTTATCTTTCTGCGCCCATCATTCCCTTGCAGCTCTCACCACAATCTCTACAAACCAATCTCTCACCGGAGACCAAACCCTCGTCTCTGAAGGTAACATCTTCGAACTGGGTTTCTTCAAGCCAGGTAACTCCTCTAACTACTACATAGGCATGTGGTACAAAAAAGTCACCGAAGTAACAATTGTTTGGGTGGCAAATAGAGACAACCCTGTCTCTGATAAGAACACTGCCACGTTAACAATATCTCGCGGTAACTTAGTTCTCTTAGACGAGTCTTCAAATCAAGTTTGGTCAACAAATATGAGTTCTCAAGGGTCAGATTCTGTTGTAGCTGTTCTCCTAGATTCTGGTAATCTCGTACTAAGAGACAGGCCTAATGCTTCAGATTCTCTGTGGCAGAGTTTTGATCACCCAACTAACACGTGGCTTCCGGGTGGCAAAATTAAACTTGATAACAAAACGAAGCAGCCTCAGTACCTCACTTCGTGGAAGAATATGGAAGATCCTGCAACGGGTCTCTTCTCTCTGGAACTTGACCCCAAAGGAAGCACTTCTTATTTGATTCTTTGGAACAAGTCTGAAAAATATTGGACTAGTGGAGCTTGGAATGGACACATTTTCAGTTTGGTTCCAGAGATGAGAGCGAATTATATATATAATTTCACTTTTGAGTCGAATGAGAACGAGAGTTACTTCACCTACTCCATGTATAATGCTTCTATTATATCTCGGTTTGTGATGGATGTTTCGGGCCAGATCAAGCAACTATCTTGGTTGGAGAGTACTCAGCAGTGGAACTTGTTTTGGTCACAGCCGAGACAACAGTGTGAGGTCTATGCTTTTTGCGGTGCGTTTGGGAGCTGCACGGAAAATTCTATGCCTTATTGTAGTTGTTTGACTGGTTTTGAGCCTAAATCAGTGTCTGATTGGAATTTGGGGGATCAATCAGGGGGGTGTCAGAGGAAAACAGAGTTGCAATGCAAGAGTTTGAGTCCCTCTAATGGGGATAAGGACAGGTTCCTTGCAATGCCCAACATGGAGTTACCTAATCATGCACAATCTTTGGGGTTAGGGGAAGTAGGGGAATGTGAATCAACTTGTTTGAAGAATTGTTCTTGCACAGGTTATGCATATGACAGTAATGGGTGTTCAATTTGGATTGGTGATCTGTTGAATTTGCAACAACTGTCTTCAGATGATAGTAGTGGCGAAACTTTGTATCTCAAGCTTGCAGCATCTGAGTTTCATGATGGTAAAAACAGTAACGGAACGATAATTGGTGTGGGTGTGGGTGTGGGTCTTGGCATTGGGTTGGTCTTGGCCCTTCTTGTGTTTTTCATGATTAGGCGAAGAAAAAGAATGGTTGGTGCAGGGAAGCCTGTGGAGGGTTCCTTGGTGGCATTTGGGTACAGAGATTTGCAAAATGCAACCAAGAATTTCTCTGAGAAATTGGGTGGAGGAGGGTTTGGTTCTGTTTTCAGAGGAACATTGGGTGATTCCAGTGTTGTAGCAGTGAAGAAGTTGGAAAGTATTAGCCAAGGAGAGAAGCAGTTCCGAACAGAAGTTAGCACAATAGGGACAATACAACATGTTAATCTTGTTAGGCTCCGTGGGTTCTGCTCTGAAGGTGCCCAAAGGCTTTTGGTTTATGATTACATGCCAAATAGCTCCTTGGATTTCCACTTGTTCCGGAACAAGAACTCTAAGGTTTTGGACTGGAAAATGAGGTACCAAATTGCTTTGGGAACAGCAAGGGGATTAAACTACCTCCATGAGAAGTGTAGAGACTGCATTATACACTGTGATGTGAAGCCAGAAAACATTCTCCTTGATGCTGAATTTTGTCCCAAGGTTGCAGACTTTGGCCTGGCCAAGCTGGTTGGAAGGGATTTCAGCAGGGTCCTCACAACCATGAGAGGAACAAGAGGGTATCTTGCTCCAGAGTGGATTTCTGGGGTGGCTATTACAGCCAAAGCTGATGTGTACAGCTACGGAATGATGCTTTTTGAGTTTGTGTCAGGTAGAAGGAACTCCGAGCCATCTGAAGATGGCAGAGTAACATTTTTTCCTACCTTGGCTGCGAACATAGTTGTCCAAGGTGGCAGTGTTCTTGGCCTTTTGGACCCTTGTTTGGAGGGAAATGCTGTCGTTGAGGAGGTGACGAGAGTAATAAAAGTTGCTTCATGGTGTGTCCAAGACAATGAAACTCACAGACCAACCATGGGTCAGGTAGTTCAAATTCTTGAGGGGATCTTGGAAGTGAATTTGCCTCCATTTCCAAAATCACTTCAAGTGTTTGTTGACAACCAGCAGGAGAACTTGGTTTTCTACACCGACTCAAACTCCACCCAAAGTTCACATGCAAAGAGCAACGTCTCAATCACCTCTTCTCAAGCCAAAAGTAACATCTCATCAAGTTCCAAGTCCTCAGGGGTAGAAAGTTAG 2619 0.4364 MISLSAPLPSKSKYIFYLLSPRKIFSGDRGKAIATYNMKNPRFFYLSRFTLFFFFFFFLSFCAHHSLAALTTISTNQSLTGDQTLVSEGNIFELGFFKPGNSSNYYIGMWYKKVTEVTIVWVANRDNPVSDKNTATLTISRGNLVLLDESSNQVWSTNMSSQGSDSVVAVLLDSGNLVLRDRPNASDSLWQSFDHPTNTWLPGGKIKLDNKTKQPQYLTSWKNMEDPATGLFSLELDPKGSTSYLILWNKSEKYWTSGAWNGHIFSLVPEMRANYIYNFTFESNENESYFTYSMYNASIISRFVMDVSGQIKQLSWLESTQQWNLFWSQPRQQCEVYAFCGAFGSCTENSMPYCSCLTGFEPKSVSDWNLGDQSGGCQRKTELQCKSLSPSNGDKDRFLAMPNMELPNHAQSLGLGEVGECESTCLKNCSCTGYAYDSNGCSIWIGDLLNLQQLSSDDSSGETLYLKLAASEFHDGKNSNGTIIGVGVGVGLGIGLVLALLVFFMIRRRKRMVGAGKPVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFRGTLGDSSVVAVKKLESISQGEKQFRTEVSTIGTIQHVNLVRLRGFCSEGAQRLLVYDYMPNSSLDFHLFRNKNSKVLDWKMRYQIALGTARGLNYLHEKCRDCIIHCDVKPENILLDAEFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGRVTFFPTLAANIVVQGGSVLGLLDPCLEGNAVVEEVTRVIKVASWCVQDNETHRPTMGQVVQILEGILEVNLPPFPKSLQVFVDNQQENLVFYTDSNSTQSSHAKSNVSITSSQAKSNISSSSKSSGVES* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1976 872 SMART ntp_6 393 468 IPR003609 -
Apr2g1976 872 ProSiteProfiles PAN/Apple domain profile. 385 469 IPR003609 -
Apr2g1976 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Apr2g1976 872 PIRSF SRK 42 860 IPR024171 GO:0004674
Apr2g1976 872 Pfam S-locus glycoprotein domain 255 364 IPR000858 GO:0048544
Apr2g1976 872 MobiDBLite consensus disorder prediction 836 872 - -
Apr2g1976 872 Gene3D Phosphorylase Kinase; domain 1 504 610 - -
Apr2g1976 872 SMART blect_4 76 196 IPR001480 -
Apr2g1976 872 ProSiteProfiles Protein kinase domain profile. 536 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1976 872 Pfam D-mannose binding lectin 118 222 IPR001480 -
Apr2g1976 872 SUPERFAMILY Protein kinase-like (PK-like) 522 841 IPR011009 -
Apr2g1976 872 CDD PAN_AP_plant 381 469 - -
Apr2g1976 872 SUPERFAMILY alpha-D-mannose-specific plant lectins 104 261 IPR036426 -
Apr2g1976 872 Gene3D - 66 194 IPR036426 -
Apr2g1976 872 CDD STKc_IRAK 542 809 - -
Apr2g1976 872 Pfam Protein kinase domain 539 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1976 872 CDD B_lectin 76 196 IPR001480 -
Apr2g1976 872 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 44 838 - -
Apr2g1976 872 ProSitePatterns Protein kinases ATP-binding region signature. 542 565 IPR017441 GO:0005524
Apr2g1976 872 Pfam PAN-like domain 393 450 IPR003609 -
Apr2g1976 872 SMART serkin_6 536 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1976 872 ProSiteProfiles Bulb-type lectin domain profile. 70 192 IPR001480 -
Apr2g1976 872 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 44 838 - -
Apr2g1976 872 Gene3D Transferase(Phosphotransferase) domain 1 611 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1976 Apr-Chr2 25156357 25159163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1976 491 816 Receptor kinase-like Gene Family AT5G20050 41.828 4.52e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr2g1976 Pkinase 6.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1976 - - gmx:100810583 1269.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1976 2 25156357 25159163 Apr2g1976 2 25156357 25159163 ECH
Apr2g1976 2 25156357 25159163 Apr3g1114 3 25732151 25735305 PCT