Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1965 ATGGCAAAGGCTAGCGAGTATAAGCTTGTCGAGCAATGTGAGGTTGTTCCTATGAAAACCAAAGACACGTCCGTTCCCCTCTCATTCCTAGACTTACATATTTCAGGTCCTGCAACTGTGACGCGTCAATTCTTCTATCAATTTCCACATACCACAAGTCATTTTTGTGAAACTACACTCCCCACACTCAAACATTCTCTCTCACTTACACTTCAACATTACTACCCTCTCGCGGGAAATCTCATCTCTCCACCGCCACCCCAAAACCCTTATATTCTATGCACCCATCAAGATTCTGTCATCTTTACCATCTTTGAATCCCATGCAGATTTCAACCATCTCTTATCCAAATATCCCAAAAGCCCATTGGAGTCAGATCCATTGGTTCCCAAGTTGACATACTCGACCCTCCATGATGATACCTTCATCTTCCCAATGCTGACATTGCAAGCCACAGTTTTCCCCAACCATGGTCTTTGCATTGCCATCGATTATCGCCATGCCATCGATGATAAGAGTTGCAGTCATTTCATGAGGGCTTGGTCTTCCATTTGTCGAAGCGGTGGCATTGACCTCACACCTGTGGAGAAGTCACCACCATGCTTTGATAGGGAAGTCCTGAAGGTCCCCAAGGGACTCGAGGCCATATTCAAAAGAGACTACCTTGAAATTAGGTCAACTTGGAAGAAAAAAGTTGTTGGTCAAAGTCAAACTGAAGAGTGCGCCCATGTGGATGAAGACTATGTTAAGGCAACGATTGTTTTTGAAAAAGATGAAATCGAGAGGCTGAAAACAAGGGGGCTGAATGAATGGAAAGAAAATGATGAATTTACAGTACCAAAATATCTATCAAAATTTGTGGTAACATGCGCTTTCGTGTGGTCTAACTTGGCTAAAACAAGATATGGAAAGAATAATGAACAAGTACAAGAAAAGATGAAAGATGAGTTTATTTATTTTGGTTTTGCCGCAGACTGCAGAGGTCGCCTTGAAAACCATGTGCCAGAAACATACATTGGAAACTGCATAGTCACGTGGCATGCAGAGCTGAAGATAAAGGAGCTAATGAGAGAAGGTGGTTTTCTAAATGCAGTCAAGGCCATTGAAATAGCAGTATCCAATATGAAAAAAAATCCCTTTGAAGGTGCAGAAAATTGGAGTGCAAGGTATAGAACTAAGTTTGAATTAGAAAGTACAATCCTAGCTATTTCATCGCCAAAGTTCAATGTTTACGACACTGATTTTGGATTTGGAAGACCTGTCAAAGTGGAGATGCTCCATCCCTCCAAGTGTATGTCTCTTGCTGATAGTGGAGGCAAGGAAGGAGGAATTGAGGTTGGCTTGTTATTCAGGAACGGGGAATATGAGCATTTCAATTCTGCAATTCAACAAGGACTTGTTGAAGCTATAAAAAGCTAA 1419 0.4179 MAKASEYKLVEQCEVVPMKTKDTSVPLSFLDLHISGPATVTRQFFYQFPHTTSHFCETTLPTLKHSLSLTLQHYYPLAGNLISPPPPQNPYILCTHQDSVIFTIFESHADFNHLLSKYPKSPLESDPLVPKLTYSTLHDDTFIFPMLTLQATVFPNHGLCIAIDYRHAIDDKSCSHFMRAWSSICRSGGIDLTPVEKSPPCFDREVLKVPKGLEAIFKRDYLEIRSTWKKKVVGQSQTEECAHVDEDYVKATIVFEKDEIERLKTRGLNEWKENDEFTVPKYLSKFVVTCAFVWSNLAKTRYGKNNEQVQEKMKDEFIYFGFAADCRGRLENHVPETYIGNCIVTWHAELKIKELMREGGFLNAVKAIEIAVSNMKKNPFEGAENWSARYRTKFELESTILAISSPKFNVYDTDFGFGRPVKVEMLHPSKCMSLADSGGKEGGIEVGLLFRNGEYEHFNSAIQQGLVEAIKS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1965 472 PANTHER - 1 467 - -
Apr2g1965 472 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 467 - -
Apr2g1965 472 Gene3D - 245 468 IPR023213 -
Apr2g1965 472 Gene3D - 7 234 IPR023213 -
Apr2g1965 472 Pfam Transferase family 19 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1965 Apr-Chr2 25026141 25027633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1965 44 421 Monolignol Biosynthesis Gene Families AT5G48930 25.258 9.34e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1965 - - aprc:113855905 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1965 2 25026141 25027633 Apr2g1965 2 25026141 25027633 ECH