Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1964 ATGGTACTCGCCGAGTCCGCGGCTTCTCTCTCTTCTTTTCAGAATCAAAGCACATCAATGGCTAAAGACATAATAGATGACTCTCAAGTTTCTCCCCCACCACACTCCGTTACCCCAACCATTCTCCCCCTCACCTTCCTTGACCTTCAATGGTTTTTCAGCCGCCACGCAACACGCATCTTCTTCTACCAATTTCCTCATCCCACTCAACATTTCCTCAAAACAGCACTTCCCATTCTCAAACACTCTCTTTCTCTTACTCTCCAACACTTCTTCCCTTTCGCCTCCAACCTCATCGTTCCTCCACAGCCACGTTTCCCTTACATCCGTTACCTTGATGGTGACTCTCTCTCCTTCACCGTCGCTGAGTCTGTCGCAGACTTCACAACCCTCACATCTGATTCGCCACAAGACGTCAATGACTGGCAACCGCTTGTTCCGGTGTTACCTTCGCCTCGTACTATGCACGATGGAACCTGCGAGTTCCCTCTCATGGCCATCAAGGTAACCGTTATACCAAACTCTGGATTTAGCATTTGTGTTATCTTCAACCACGTGGCAGGGGATGGCAGAACGCTTCATCATTTCATGAAGTTTTGGGCCTCTGTTTGCAAATCAAAAGGGGATTTGGCTTCCCTTCAAGCCTTTGGTTCTCTTTCTCTACCCTTCCATGATAGGGACATAGTGAACGACCCGAAAGGGCTCAAGCTCATTTACTTACAAGACATGAGAAACTTGATGTCGCAAAGCACGCAGTTCGCAGGGATTTTACGTCGTGTTTCCGCTGATAAGGTACGTGCCAATCTTACATTTGATCGCGAACAAGCCGAGAGAATGAAAAGATGGGTTTATCTTAAATGTAATAATAACAGTCACGGTAGTTCAGGGACGTTACACATATCAACCTTTGTGGTGACGTGTTCTTTGATGTGGGTTTGTATGATAAAATCAGAACTGAAGGAAAAGGAAGGTAGTTATGTTACAGAAGAGTACTATGATGAACCATGCAACTTGGCGTTTTCAGCGGATTGTCATGATCATCCTCAATTTTTGTTGCCATCTAATTACTTTGGAAATTGCTTAGTTCCACTTGTTACGTCTGTGAAAAGGAGTGCGCTAGAGGGAGAAAACGGGGTTATTGTGGCGGCAAAAGCTATTGAGAGGATGATTAGGGGTTTCAAGATTGATGCTTTGAGTGGGGCAGAAACAGTGATGTCAGATTTTAGAGAATTGGTGAAAAGTGGTCAATCTCTTGTAGTAATTGTTGGCTCACCGAAATTGACCGCGTACAACACTGACTTCGGGTGGGGAAAGCCTAGGAAGTCTGAAGTGGTTAATCTTGATTCTGTGGGAACAATTTCTCTTACCGATTGTAGGGACACCCAAGGTGGAGTTCAAGTTGGAATTGCACTAGAAAGGATTCGAATGACGAATTTCACAAACATCATGGAACAACAGCTTAGTAATATTGCAGTTCGTGATTAA 1485 0.4478 MVLAESAASLSSFQNQSTSMAKDIIDDSQVSPPPHSVTPTILPLTFLDLQWFFSRHATRIFFYQFPHPTQHFLKTALPILKHSLSLTLQHFFPFASNLIVPPQPRFPYIRYLDGDSLSFTVAESVADFTTLTSDSPQDVNDWQPLVPVLPSPRTMHDGTCEFPLMAIKVTVIPNSGFSICVIFNHVAGDGRTLHHFMKFWASVCKSKGDLASLQAFGSLSLPFHDRDIVNDPKGLKLIYLQDMRNLMSQSTQFAGILRRVSADKVRANLTFDREQAERMKRWVYLKCNNNSHGSSGTLHISTFVVTCSLMWVCMIKSELKEKEGSYVTEEYYDEPCNLAFSADCHDHPQFLLPSNYFGNCLVPLVTSVKRSALEGENGVIVAAKAIERMIRGFKIDALSGAETVMSDFRELVKSGQSLVVIVGSPKLTAYNTDFGWGKPRKSEVVNLDSVGTISLTDCRDTQGGVQVGIALERIRMTNFTNIMEQQLSNIAVRD* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1964 494 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 23 491 - -
Apr2g1964 494 PANTHER - 23 491 - -
Apr2g1964 494 Pfam Transferase family 31 485 - -
Apr2g1964 494 Gene3D - 260 491 IPR023213 -
Apr2g1964 494 Gene3D - 22 256 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1964 Apr-Chr2 25018810 25020515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1964 56 483 Monolignol Biosynthesis Gene Families AT5G48930 21.525 5.61e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1964 - - gmx:102667695 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1964 2 25018810 25020515 Apr2g1964 2 25018810 25020515 ECH