Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1963 ATGGCAGAGCCTAGAGCACATAAGCTTGTTGAGAAATCTCAGGTTGGTCCAGCTATAAGCAAAACCACATCTCTTCCCCTCACATTCCTTGATTTGTCTTTGGCAGGTCCTGTTTATGTGAGACGTCAATTCTTCTATAAGTATCCGCATGCCACACACTATTTTTGTGAAACTACACTCCCTGCTCTCAAACACACTCTCTCTCTTACCCTTAAATATTTCTTCCCTCTCGCTGGAAACCTCATGCGTCCACCACCACCCCACAAACCCTTCATTCGTTGCACCGATGATGACTCTGTCACCTTAACCATCTTAGAGTCCAAAGCGGATTTCAACCATCTTTCTTCCAACCAACCCAAAAATCTCAAAGAGTTGGATCACTTGGTTCCCAAGTTGACATGCACAACTATCCATGAAGAAGACACTTTCATATTTCCTTTAGTAGCCTTGCAAGTCACGATTTTTCCCAACCATGGCTTTTGCATGGCAATCACATATTGCCACGTGATGGATGATAGGTGTTGTAGTCATTTCATGAAGTCTTGGTCTTCCATTTGTCGAAGCGGCGGCGTTGACCTCACACTTGTTGAGAACTCACCACCGTGCTTTGATAGGGAAGTGTTGAAGGACCCCAAGGGACTCGAGGCTATTTTCTTAGGAGACTATTTTGAAGAGAGGTCAACGTGGAAGGACAAACTCATTATTGGTCAAACTCCTAAACGTGCGTGTGATGATGGGGACTATGTTAAGGCAACGATTGTTTTTGGAAGAGATGATATTGAGAGCCTAAAAACATGGGTGCTGAATCACTGGAAGAAAAAGGACGAATTTAAAGCGCCAAAATATCTATCAAAATTCGTTGTGACTGGTGCTTTCGTGTGGGCTAGTTTGGTTAAAGCAAGATATGGAGATGATGATAATAAAGAAGAGATGAAAGAGGAGTACTTTCGTTTTGCAGCAGATTGTAGAGATCGTCTTGATTACCCGATTCCAGCGACGTACTTCGGAAACTGCTTAACGAAATGTTATGCAACTCTGAAGAGAAAGGACCTTAAGGGAGAAGGTGGTTTTGTGAATGCAATCATGGCTATTGAAAGGGCAATAACTAGCATGAAAAGGAAACCTTTGGAAGGTGCTGAAAACTGGAAGACATTGTTTACAAAGATGTTTGTGTTGGGAAGTACGTTGTTAGTTACAGGGTCACCTAAGTTCACTGTTTATGAGACTGATTTTGGATTTGGAAGACCTATCAAAGTTGAGATGTTACATTCCTTCAAGTGTATGTCTCTTGCCGAAAGTACAAATGAGGATGGATTAGAGGTTGGCTTGGTATTTAGAAGCGGGGAATTTGAATATTTCATATCTGTCATTGAGCAACAACTTGTAGCTTTCAAATCCCTTTAA 1404 0.4188 MAEPRAHKLVEKSQVGPAISKTTSLPLTFLDLSLAGPVYVRRQFFYKYPHATHYFCETTLPALKHTLSLTLKYFFPLAGNLMRPPPPHKPFIRCTDDDSVTLTILESKADFNHLSSNQPKNLKELDHLVPKLTCTTIHEEDTFIFPLVALQVTIFPNHGFCMAITYCHVMDDRCCSHFMKSWSSICRSGGVDLTLVENSPPCFDREVLKDPKGLEAIFLGDYFEERSTWKDKLIIGQTPKRACDDGDYVKATIVFGRDDIESLKTWVLNHWKKKDEFKAPKYLSKFVVTGAFVWASLVKARYGDDDNKEEMKEEYFRFAADCRDRLDYPIPATYFGNCLTKCYATLKRKDLKGEGGFVNAIMAIERAITSMKRKPLEGAENWKTLFTKMFVLGSTLLVTGSPKFTVYETDFGFGRPIKVEMLHSFKCMSLAESTNEDGLEVGLVFRSGEFEYFISVIEQQLVAFKSL* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1963 467 Gene3D - 7 234 IPR023213 -
Apr2g1963 467 PANTHER - 1 466 - -
Apr2g1963 467 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 466 - -
Apr2g1963 467 Pfam Transferase family 20 443 - -
Apr2g1963 467 Gene3D - 245 463 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1963 Apr-Chr2 25012654 25014057 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1963 44 453 Monolignol Biosynthesis Gene Families AT5G48930 24.356 9.83e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1963 - - gmx:100813271 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1963 2 25012654 25014057 Apr2g1963 2 25012654 25014057 ECH