Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1960 ATGGCTCATGAAACCAATGGTGAAGCAGTAGTGAGGCTCATAGAACAGTGTCAAGTAGCTCCACCATCAGGTTCACTTCCTTCAACCACCCTTCCCCTCACTTTCTTCGATATTCCATGGTTCTTATGCCGGCCAGTCCAACGCATCTTCTTCTACCACTTTCCTCATTCCACTCGTCACTTTCTCGAATCTACACTTCCTATTCTCAAACAATCTCTTTCACTCACACTCCAACACTTCTTTCCTTTTGCCTCTAACATAGTTGTCCCTCCACAATTCCATCTTTCTTATATTCGATACCTTAATGGTGACTCACTCTCCTTTACTGTTGCTGAGTCTGCGGCAGATTTCAACCTTCTGGTATCCGATTCACCGCAAGATGTTCGAAACTGGCACCCTCTTGTCCCTACTTTGCCTCCAACACGTACTGAGGAGGATGGCACACGTGTGATCCCTCTCATGGCAATCCAAATAACGGTTCTACCAAACAATGGACTTAGCATCTGTGTTACTTTCAACCACCTTGCTAGCGATGGCAAGTCACTTCATCATTTCATGAAGTTTTGGGCCTCAGTTTGCAAGGCAAGAGGGGATATGGCTTCTCTTGAAGTCTCTTTGTCATTTCCTTCCCACGAAAGGGACAAAGTTAAAGACTTCAAAGGACTTAAGCTCCTCTACTTAGAAGAACTTCAAATTCGTGATCAGGCGAAAAACATGGAGTTTAGAGAGCTAGCGAAAGATGTTTTGACTAACAAGGTACGGTTCACTCTAGTGTTGAGTCGTGAAAAAGTTGACAAACTAAAGAAATGGGTCACTCTTAAATGTGCTAACCACGATTCTGTGCCATTGCACATATCAACCTTTGTGGTGACATGCTCCTTGATTTGGGGTTGCATGATAAAATCAAAGGTCAACGGAGACAACTACGATGGAAGAGAATGTGATGATCTTTGCAACTTGGTGATTCTAGCGGATTGTCGTGATCGTCCTGAATTTTCATTACCTTCAACGTATTTTGGGAATTGCTTAGTTTCTTGCATTGTGGCAATTAAGAGGAGTGAGCTAGTGAGAGAAAATGGTTTCATTGAGGGGGCAAATGCTATTGAAAGACATGTCCGAGATTTGAGGAGTGATGCTTTGAGAAAGGCTGAAACATTGTTCTCAGACTATAAAGAATTGAGAAAACCTTGCAATTCTGTGTTAGTAGTTGCGGGCTCACCAAAACTGGCCGTGTATGAGACTGATTTTGGATGGGGTAAGCCTAAGAAATCTGAAGCAGTGCATATTGATTCGTCAGAATCCATTTCTCTTTCTGATTGTAGAGACAAAAAAGGTGGAATTGAGGTTGGATTGGCGCTTGAAAGAACTCAGATGAATAATTTCATCAACATCTTAGAGGAGCAACTCAATAATATAATTTCTGAGTGA 1428 0.423 MAHETNGEAVVRLIEQCQVAPPSGSLPSTTLPLTFFDIPWFLCRPVQRIFFYHFPHSTRHFLESTLPILKQSLSLTLQHFFPFASNIVVPPQFHLSYIRYLNGDSLSFTVAESAADFNLLVSDSPQDVRNWHPLVPTLPPTRTEEDGTRVIPLMAIQITVLPNNGLSICVTFNHLASDGKSLHHFMKFWASVCKARGDMASLEVSLSFPSHERDKVKDFKGLKLLYLEELQIRDQAKNMEFRELAKDVLTNKVRFTLVLSREKVDKLKKWVTLKCANHDSVPLHISTFVVTCSLIWGCMIKSKVNGDNYDGRECDDLCNLVILADCRDRPEFSLPSTYFGNCLVSCIVAIKRSELVRENGFIEGANAIERHVRDLRSDALRKAETLFSDYKELRKPCNSVLVVAGSPKLAVYETDFGWGKPKKSEAVHIDSSESISLSDCRDKKGGIEVGLALERTQMNNFINILEEQLNNIISE* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1960 475 PANTHER - 11 473 - -
Apr2g1960 475 Pfam Transferase family 18 463 - -
Apr2g1960 475 Gene3D - 11 242 IPR023213 -
Apr2g1960 475 Gene3D - 249 472 IPR023213 -
Apr2g1960 475 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 11 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1960 Apr-Chr2 24980462 24981889 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1960 49 467 Monolignol Biosynthesis Gene Families AT5G48930 22.323 4.49e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1960 - - gmx:100797294 644.425