Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1951 ATGAAGATTGCTTCCTTCTTCTCCAAGGCTTTCCATAGCTCCCCTTCCTGCTCCAATGTTGTTCTCCTTTGCACTCTAAGTGGTGGAGGTTTGATTGCATACTCAGAATTACAATCAGATGCCAAACTTCCTGCTCCTAGTATTGATCCTAATGTGCCCAAGAAAAAGAGAGTGGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTTAAGGATCTCGATGCTTCCTTATATGATGTTCAGGTTGTTTCCCCTCGTAACTACTTTGCATTCACACCTTTATTACCTAGTGTCACCTGTGGGACAGTTGAAGCACGAAGCATTGTAGAGCCAGTCCGAAACATCATAAAAAAGAGAAAAGGAGAAATTAAATTTTGGGAGGCAGAATGCTTGAAGATTGATTCTGCAAACAAAAAGGTTTTATGTGGGTCCAATATTGACAACAACTTAGTGGGAAATGGCGAATTTTCTTTGGACTATGACTATTTGGTTGTAGCAATAGGAGCACAAGTAAATACATTTGACACCCCAGGTGTCGTGGAGAACTGTCATTTTCTAAAGGAGGTAGAGGATGCTCAGAAGATTAGACAGACTGTGATTGATTGCTTTGAGAAAGCTGTTCTTCCATCTTTATCTGAAGAAGAACGAAGGACAAATTTGCATTTCATAGTTGTTGGAGGGGGTCCAACTGGTGTGGAATTTGCTGCTGAGCTTCATGACTATGTCCAAGAAGATTTAGTCAATTTGTACCCATCTGTTAAAGATATAGTGAAGATAACAGTGATTCAATCAGGAGATCACATCTTGAACACGTTTGATGAAAGAATTAGTTCATTTGCTGAACAGAAGTTTGGAAGAGATGGTATAGAAGTTCAGACAGGATGTCGTGTTGTGAGTGTTAATGATAAGGACATCACAATGAAAGTAAAATCAACTGGAGAAGTGTGTTCTGTTCCCCATGGATTGGTTGTCTGGTCCACAGGAATTGCAACTCGTCCTGTTATCAGAGACTTTATGGAGCAAATTGGTCAGGGTAAGAGGAATATTCTAGCAACGGATGAATGGTTACGAGTGAAGGGATGTGAATCTGTGTATGCTATTGGTGATTGCTCTTCAATAAATCAGCGTAAAATCAGGGATGATACCTTGGCCATTTTTAAAGCTGCGGACAAGGACAACTCTGGTACCTTAACTAAAGAAGAATTCAAGGATGTGATGGAAGACATTATCTTAAGATATCCGCAAGTGGAACACTACATAAAGAGCCAACATCTGCTTGACTTGACTGCTCTGTGGAAAGATTCCCAAGGAAATGATAGGGAAGAAATAGACATGGAAGAGTTTAAGTCTGTCCTTTGTCGTGTGGATTCACAGTTGAAGACTTTGCCAGCAACTGCACAGGTTGCTGCACAGCAGGGTGCATATCTGGCTAGTTGCTTGAACCGCAGGGATCACTGTACAGAGCATCCTGAAGGCCCTCTAAGATTTGAAAAATCTGGACGTCATAAGTTTCGTCCCTTTAGGTATAAGCATTTTGGGCAATTTGCTCCTCTTGGTGGAGAGCAAGCAGCTGCAGAACTTCCTGGAGATTGGGTTTCCATGGGTCATAGCACTCAGTGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGGTGTTAGTCGTATCAGATTGGACAAGAAGATACATATTTGGCAGAGATTCTAGTCGTATATAA 1734 0.4181 MKIASFFSKAFHSSPSCSNVVLLCTLSGGGLIAYSELQSDAKLPAPSIDPNVPKKKRVVVLGTGWAGTSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEIKFWEAECLKIDSANKKVLCGSNIDNNLVGNGEFSLDYDYLVVAIGAQVNTFDTPGVVENCHFLKEVEDAQKIRQTVIDCFEKAVLPSLSEEERRTNLHFIVVGGGPTGVEFAAELHDYVQEDLVNLYPSVKDIVKITVIQSGDHILNTFDERISSFAEQKFGRDGIEVQTGCRVVSVNDKDITMKVKSTGEVCSVPHGLVVWSTGIATRPVIRDFMEQIGQGKRNILATDEWLRVKGCESVYAIGDCSSINQRKIRDDTLAIFKAADKDNSGTLTKEEFKDVMEDIILRYPQVEHYIKSQHLLDLTALWKDSQGNDREEIDMEEFKSVLCRVDSQLKTLPATAQVAAQQGAYLASCLNRRDHCTEHPEGPLRFEKSGRHKFRPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRYIFGRDSSRI* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1951 577 Pfam EF hand 385 409 IPR002048 GO:0005509
Apr2g1951 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 376 IPR023753 GO:0016491
Apr2g1951 577 SUPERFAMILY FAD/NAD(P)-binding domain 220 375 IPR036188 -
Apr2g1951 577 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 54 577 - -
Apr2g1951 577 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Apr2g1951 577 SMART efh_1 382 410 IPR002048 GO:0005509
Apr2g1951 577 SUPERFAMILY FAD/NAD(P)-binding domain 55 274 IPR036188 -
Apr2g1951 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 58 77 - -
Apr2g1951 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Apr2g1951 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 222 240 - -
Apr2g1951 577 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Apr2g1951 577 SUPERFAMILY EF-hand 332 461 IPR011992 -
Apr2g1951 577 PANTHER NADH DEHYDROGENASE 54 577 IPR045024 GO:0003954|GO:0006116
Apr2g1951 577 Gene3D - 46 401 - -
Apr2g1951 577 Gene3D - 424 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1951 Apr-Chr2 24934908 24940074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1951 7 577 Chloroplast and Mitochondria Gene Families AT4G21490 64.940 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1951 K03885 - gmx:100793566 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1951 2 24934908 24940074 Apr2g1951 2 24934908 24940074 ECH