Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1943 ATGGGTGAAGAGAGATCTGCTTCACAGTATAGCGGACTGAAGATCCATGCACAAGTACTATTGGGATTTATGTTGATCTGCTTAGTCCAATTTTCACTTGCAGACACTAATCCCAGTGATGTTGCTGCAATTAATAGCTTATACACTGCATTGGGCAACCCTGTTCTTCCTGGGTGGGTTTCTAGCGGGGGAGACCCATGTGGACAAGGGTGGCAAGGCGTTCAATGTAATGGTTCAGTCATACAAGAAATAGTTCTGAATGGTGCAAACTTGGGAGGAGAACTGGGAGACAGCTTGGGAACTTTTGTTTCTATCAAAGCAATAGTTCTAAACAACAACCACATTGGGGGAAGTATTCCATCCAGTTTGCCAGCCACTTTACAAAACTTTTTTCTTTCAGATAACCAGTTCACTGGAAGTATTCCGACATCTTTATCCACATTGGCTGAACTGACTGACATGTCTCTTAACGACAATCTTTTAACTGGAGAAATACCAGATGTGTTTCAATCTCTTACAAAATTGATCAATCTAGATTTATCTAATAACAATTTGAGTGGGGAATTGCCTTCATCTATGGAGAATTTGTCAGCTCTGACCTCCGTACATTTACAGAACAATAACTTGTCTGGGACCCTTGGTGTTTTACAAGACCTTCCACTGCAAGATTTGAATGTTGAGAACAACCAGTTTGCTGGACCAATACCTCCAAAGTTGTTGAACATCCCTAACTTCAGAAAAGATGGAAACCCGTTTAATGTTGAAGGCAATTCGACTGTAGCCCCAGCCCATCCACCTCATTCTCCAGTGATAGCTCCACCATCAGGAACTGTGGTTTCTGTGACACCACCATCTGGACATGTACCTACTAAACAGACTGATGGACCAACTGCAGGAAAGGAAACAAATTCTGTGAAATCAAAACAATCCACCAAAAGGGTGGTTTGGATATCTATTTCTGCTATATTGATGTTTATCATTATAGCATTGGGGCTTGTTCTCTTTGTCCCGAGATGTGCCAGAAGAGAACGGGTTGGCAGAATTTCCAAGCAACATCAAGTTGGTGCATATGCAGGTGAAAGACACAATCATAGGGATAATGGGGCTTTAGTCCAACCACCTAGTCAAACTGAGAAAGTACCAAAAGGGGCTGTTATGAGGCCGAAAGGGGATCATCAAGAAGAGACAAGGAGAGCAATGGCCATTCCAAAGCCACAAAGTGAGCCAGAGAAGGATGAACAAAGAATAGGAACAATACCAAAACTGTTGGATCATGAGATAGATATGAGTGCATCAGATGTATATTCAATGCCTTCTCCACCTCCTCCTCCCCCTCCCCCTCCTCCACCACCTCCTACTGAGAGGGTGATTGTCGAACCAACCTCTTTCCACAGGGGGGGTAACATAAAAAAAAGTCCAATTCCTCCAACTTTTGCAAAAACTTTCACAATTGCATCCCTTCAGCAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGTTTAGGCATGCTGGGGAGTGTGTATAGGGCAGAGCTTCCTAATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTGATCACCAAACAGATGATGAGTTTCTTGAATTGGTAAACAGCATTGACACAATCCGGCATGCAAATATTGTTGAGCTTATTGGGTACTGTGCAGAGCATGGTCAAAGGCTTCTGATTTATGAGTACTGCAGTAATGGGTCCCTGCAGGATGCACTGCATTCATATGAAGAATTCAAAACAAGACTGTCTTGGAATGCTCGCATTCGGATAGCTCTTGGAGCAGCTAGAGCCTTAGAGTACTTGCACGAGCAATGTCAACCACCTGTTGTACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATGTTTCTGTTCGTGTATCTGACTGTGGATTGGCTCCATTAATAACTAAAGGTTCTGTAAGTCAGCTTTCAGGACAACTGCTAACAGCTTATGGCTATGGAGCTCCAGAGTTTGAGTCTGGAATTTACACTTACCAGAGTGATGTTTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACTGGCCGTCAGTCCTACGACAGGATGCGCCCTCGAGGGGAGCAGTTTCTGGTGAGATGGGCAATTCCTCAACTTCATGACATTGATGCATTATCAAAGATGGTTGATCCTTCTCTAAATGGAGATTACCCTGCCAAATCATTGTCAAATTTTGCAGATATCATTTCTAGATGTGTTCAGACAGAGCCAGAATTTAGGCCAGCAATGTCAGAGGTTGTCTTGTACTTATTAAATATGATAAGGAGGGAATCTCAGCAAAATGGTTCAAATGAGTAA 2352 0.4247 MGEERSASQYSGLKIHAQVLLGFMLICLVQFSLADTNPSDVAAINSLYTALGNPVLPGWVSSGGDPCGQGWQGVQCNGSVIQEIVLNGANLGGELGDSLGTFVSIKAIVLNNNHIGGSIPSSLPATLQNFFLSDNQFTGSIPTSLSTLAELTDMSLNDNLLTGEIPDVFQSLTKLINLDLSNNNLSGELPSSMENLSALTSVHLQNNNLSGTLGVLQDLPLQDLNVENNQFAGPIPPKLLNIPNFRKDGNPFNVEGNSTVAPAHPPHSPVIAPPSGTVVSVTPPSGHVPTKQTDGPTAGKETNSVKSKQSTKRVVWISISAILMFIIIALGLVLFVPRCARRERVGRISKQHQVGAYAGERHNHRDNGALVQPPSQTEKVPKGAVMRPKGDHQEETRRAMAIPKPQSEPEKDEQRIGTIPKLLDHEIDMSASDVYSMPSPPPPPPPPPPPPPTERVIVEPTSFHRGGNIKKSPIPPTFAKTFTIASLQQYTNSFSQDNLIGLGMLGSVYRAELPNGKILAVKKLDKRVSDHQTDDEFLELVNSIDTIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDALHSYEEFKTRLSWNARIRIALGAARALEYLHEQCQPPVVHRNFKSANILLDDDVSVRVSDCGLAPLITKGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRMRPRGEQFLVRWAIPQLHDIDALSKMVDPSLNGDYPAKSLSNFADIISRCVQTEPEFRPAMSEVVLYLLNMIRRESQQNGSNE* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1943 783 PANTHER OS01G0253100 PROTEIN 25 782 IPR045271 GO:0004714|GO:0006468
Apr2g1943 783 SUPERFAMILY L domain-like 36 244 - -
Apr2g1943 783 Gene3D Phosphorylase Kinase; domain 1 464 571 - -
Apr2g1943 783 Gene3D Ribonuclease Inhibitor 37 260 IPR032675 -
Apr2g1943 783 MobiDBLite consensus disorder prediction 364 414 - -
Apr2g1943 783 MobiDBLite consensus disorder prediction 436 456 - -
Apr2g1943 783 MobiDBLite consensus disorder prediction 282 307 - -
Apr2g1943 783 ProSiteProfiles Protein kinase domain profile. 494 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1943 783 MobiDBLite consensus disorder prediction 432 456 - -
Apr2g1943 783 Pfam Protein tyrosine and serine/threonine kinase 497 766 IPR001245 GO:0004672|GO:0006468
Apr2g1943 783 SUPERFAMILY Protein kinase-like (PK-like) 471 768 IPR011009 -
Apr2g1943 783 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 25 782 - -
Apr2g1943 783 MobiDBLite consensus disorder prediction 384 414 - -
Apr2g1943 783 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Apr2g1943 783 Gene3D Transferase(Phosphotransferase) domain 1 572 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1943 Apr-Chr2 24880461 24886923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1943 26 780 Strubbelig Receptor Gene Family AT4G03390 62.190 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Apr2g1943 PK_Tyr_Ser-Thr 7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1943 - - gmx:100811490 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1943 2 24880461 24886923 Apr2g1943 2 24880461 24886923 ECH
Apr2g1943 2 24880461 24886923 Apr3g1082 3 25459619 25467721 PCT