Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1937 ATGGGCTGTTGTGTTTCAACAAGCAGTAAGAGTGCTTGTAGTAGCAGAAGCAATGGAGACACAGTCTCTCCGACGTGTCTAGATATTGGATTCTGTGGTCAAAAGAGTGCCAGGAGAACATTCTCTGATCATGTTGTCTCTCTGCATCAAGTACCCAACAGAATTTTCACCAATGGAAAGAGCAGATCTTCTTGCATATTTACACAGCAGGGTCGTAAGGGCATTAATCAGGATGCCATGATTGTATGGGAAGATTTCATGTCAGAAGATGTGACCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCACCTTGTTGCACGCAAAGTCAGGGATGCATTGCCAATTAAACTGCTTTCATTTTTGCATTCCTCTGAATCGGGGCGAAATGGTTTAGGCAAAGTTTGTTTCAAAGGGAACACAGAGCCTGAAAGTGGAGAATCTCAGAAGGATTTGTCTGCTGAAGATAAACTGAATTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTGAGGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACGGCTGTCACTATAGTGAAGCAGGGTTCAAATTTATTCATGGGCAATATTGGAGATTCCCGGGCAATCATGGGATCTAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAACGAATTAAACGGTGCAAGGGTAGGGTATTTGCATTACAGGATGAGCCAGAAGTTCCTAGGGTGTGGTTGCCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAGTACGGTGTGATTTCTATTCCTGAATTTTCTCATCGGCTGCTTACAGACAGAGATCAGTTCATTGTTCTTGCTTCAGATGGGGTATGGGATGTTTTGAGTAATGAAGAGGTAGTTGAGATAGTATCTTCAGCTCCAACTCGTTCATCAGCGGCAAGGATTCTGGTGGATTCTGCTGCTCGTGAATGGAAACTTAAATATCCTACATCAAAAATGGATGATTGTGCTGTTGTCTGCGTATTTTTGGATGGGAAAATGGATTCAGAATCTGATTGTGAGGAGCAAGGCTTTTCTGCTGCAAGCCTCCACAGCAACCATTCGGGTAATCCAGTTGAGTCAGATGATGGTCAAAAGCCTGAACCATATTTGCAAAGGAACTTTACTGTGAGATCTTCAGAAGAAAATGAAAACTATGGAGGACAAGGAGGAGTAGCTGTTGATGTTGAAGATGGAATATTATCAACTGATGATCAAAACTGGTCAGGTCTAGAGGGTGTCACCCGTGTAAACTCACTTGTTCAACTTCCTAGATTTTCTGAGGAAAGGCCAAAATCTTGA 1413 0.4317 MGCCVSTSSKSACSSRSNGDTVSPTCLDIGFCGQKSARRTFSDHVVSLHQVPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARKVRDALPIKLLSFLHSSESGRNGLGKVCFKGNTEPESGESQKDLSAEDKLNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCVFLDGKMDSESDCEEQGFSAASLHSNHSGNPVESDDGQKPEPYLQRNFTVRSSEENENYGGQGGVAVDVEDGILSTDDQNWSGLEGVTRVNSLVQLPRFSEERPKS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1937 470 ProSiteProfiles PPM-type phosphatase domain profile. 63 367 IPR001932 -
Apr2g1937 470 Gene3D - 50 369 IPR036457 -
Apr2g1937 470 MobiDBLite consensus disorder prediction 1 20 - -
Apr2g1937 470 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 458 - -
Apr2g1937 470 SUPERFAMILY PP2C-like 55 369 IPR036457 -
Apr2g1937 470 Pfam Protein phosphatase 2C 141 344 IPR001932 -
Apr2g1937 470 MobiDBLite consensus disorder prediction 381 406 - -
Apr2g1937 470 SMART PP2C_4 52 365 IPR001932 -
Apr2g1937 470 MobiDBLite consensus disorder prediction 381 397 - -
Apr2g1937 470 CDD PP2Cc 62 367 IPR001932 -
Apr2g1937 470 PANTHER ALPHABET, ISOFORM E-RELATED 1 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1937 Apr-Chr2 24832937 24837515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1937 1 470 PP2C-type Phosphatase Gene Family AT1G03590 70.231 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1937 - - gmx:100777448 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1937 2 24832937 24837515 Apr2g1937 2 24832937 24837515 ECH
Apr2g1937 2 24832937 24837515 Apr3g1077 3 25417867 25422140 PCT