Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1931 ATGCTCATGGATGCAACTAAGAACAGTGGAAATTTCACAAAGGAAGTGGACGATGAAACTCACAAGGTTACTGAAAGCCAAGATTGGGAGATTGCAAAGGGAAAGGGTATGGATTCAAGTTCTCAGAGGCGTCAATGGAAGCCAGTTTTTGATGACGTTTCCATCTCACATAACAGGCCTCTCAAGAAAATCCGTAGCCCTGATCGCCAAACCACAAACCAATCTTCTCCTTCTTCTTCATCATCATCTTCTTCTATGTCCTTTCAACCTTCTCCCCTCTTTGCTCCTCCTTCTACTCCTTCACCCTCTTCAAGAATCGTGTTCCCTTTTGCCTTCGACGCTTCCCAACACCCCATGCAATTCCCACACCAATTTGGAACCACAAATTCACCTTTACTTCGTCCACCCTTTCAAAACCAACAACAACAAATGATATCCTTTCAAAACCAACAACAACAGCATAACCTGGCATATCCACCAATCTTAGCTCGAGATTCCACCCTTTTACATCATCATCAACAACAACAGCATCACCAGCAACTTCTTCGGTATTGGAGTGACGCACTGAATCTAAGTCCAAGAGGAATGATAAACAGGTTGGGGCCAGATGGAAGGCCACTATATAGGCCTCCAACACAACCCATAAACACAACCAAACTCTATAGAGGAGTGAGACAGCGCCATTGGGGAAAATGGGTAGCTGAAATTCGTCTCCCTCGAAACAGAACGCGTCTTTGGTTAGGCACATTCGACACTGCAGAAGATGCTGCCATGGCCTATGATCGCGAAGCCTTCAAGTTAAGAGGAGAAAATGCAAGGCTCAATTTCCCTGAACTCTTCCTTAACAAAGAGAAAGAAAAAGAACCTTCTTCACCAGTTCCAACACCTTCTGAACAAGCACCAACAACAGAAGAGTCCAATGAGAATGACTCCGCAATTGGGTCTAGTGATGCCACTGTAAGCGATGAGGTTCATGCAGTTGCTGCAGGTTCTGAAGGAGGTGAAGGGGTTTCACAGTCACAAGAACTGGTTTGGGGAGAAATGTCTGCATGGTTCAATGCAATTCCTGCTGCTTGGGGTCCTGGTAGTCCTGTGTGGGATGATTTGGACACTACTAATAACCTTCTTTTGCAGTCTCAGATTCCCTTTTCTAATCCCAATCAACAACAATTAAATGATGCTGCTGATGCTAGTGATGCTCAGAGACAAGAACATAACACTGGACCAGGTTTTAACCTATGGAAGGACCAGGATTAA 1257 0.4479 MLMDATKNSGNFTKEVDDETHKVTESQDWEIAKGKGMDSSSQRRQWKPVFDDVSISHNRPLKKIRSPDRQTTNQSSPSSSSSSSSMSFQPSPLFAPPSTPSPSSRIVFPFAFDASQHPMQFPHQFGTTNSPLLRPPFQNQQQQMISFQNQQQQHNLAYPPILARDSTLLHHHQQQQHHQQLLRYWSDALNLSPRGMINRLGPDGRPLYRPPTQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKEKEKEPSSPVPTPSEQAPTTEESNENDSAIGSSDATVSDEVHAVAAGSEGGEGVSQSQELVWGEMSAWFNAIPAAWGPGSPVWDDLDTTNNLLLQSQIPFSNPNQQQLNDAADASDAQRQEHNTGPGFNLWKDQD* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1931 418 PRINTS Ethylene responsive element binding protein signature 221 232 IPR001471 GO:0003700|GO:0006355
Apr2g1931 418 PRINTS Ethylene responsive element binding protein signature 243 259 IPR001471 GO:0003700|GO:0006355
Apr2g1931 418 MobiDBLite consensus disorder prediction 281 319 - -
Apr2g1931 418 MobiDBLite consensus disorder prediction 67 92 - -
Apr2g1931 418 MobiDBLite consensus disorder prediction 297 318 - -
Apr2g1931 418 MobiDBLite consensus disorder prediction 11 32 - -
Apr2g1931 418 CDD AP2 219 279 IPR001471 GO:0003700|GO:0006355
Apr2g1931 418 SUPERFAMILY DNA-binding domain 220 278 IPR016177 GO:0003677
Apr2g1931 418 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 394 - -
Apr2g1931 418 ProSiteProfiles AP2/ERF domain profile. 220 277 IPR001471 GO:0003700|GO:0006355
Apr2g1931 418 MobiDBLite consensus disorder prediction 1 100 - -
Apr2g1931 418 Gene3D AP2/ERF domain 220 278 IPR036955 GO:0003700|GO:0006355
Apr2g1931 418 SMART rav1_2 220 283 IPR001471 GO:0003700|GO:0006355
Apr2g1931 418 MobiDBLite consensus disorder prediction 384 418 - -
Apr2g1931 418 Pfam AP2 domain 221 269 IPR001471 GO:0003700|GO:0006355
Apr2g1931 418 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 3 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1931 Apr-Chr2 24774506 24776782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1931 3 368 AP2-EREBP Transcription Factor Family AT2G20880 43.008 7.29e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr2g1931 AP2 2.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1931 - - gmx:100809887 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1931 2 24774506 24776782 Apr2g1931 2 24774506 24776782 ECH