Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1920 ATGGCGTCTGGACCATCGGGTCACGGTAACGGTGGTTCCAAGGGCTTCGATTTTGGCTCCGATGACATCCTTTGTTCATACGAAGATGATTATATCAACCACGATTCTTCTAATGGAACTCACACCGATCCCAGCACCAAGGATTTTCACATTTCAAGGATGGGAAGAACATCAATGTTGCCTGCTACTGCCTATAGTTCGCCTGAAGATTCTTTAGGCCAGGATGTGATTGCAACTGTTGAGAAGAGTATGAAAACATATGCTGACAATGTGATGCGGTTTCTTGAAGGAATTAGTCTAAGGCTGTCTCAGTTGGAATTATATTGTTATAATCTTGACAAGTCAATTGGAGAAATGCGATCTGATTTAAATAGTGACCATGAGGAGGCAGATACAAAACTCAAATCTCTCGATAAACACCTTCAGGAAGTATATAGGTCTGTGCAAATTTTAAGAGACAAGCAAGAGCTAGCTGAGACTCAGAAAGAGTTAGCCAAGCTTCAACTTGTTCAGAAAGAATCATCTTCCTCAAGCCATCCGCAGTCCAATGAGGAGAGATCTTCACCTTCTGCCTCAGATCCAAAAAGAACTGATAATGCATCTGACCCTCGTAATCAGCAGTTAGCTCTTGCCCTACCTCATCAAGTTGCTCCCCGGCAGCAGCCTGTGGCACCCCCCTCTCAAGCTCAGTCCCCAAATGTGACCCAAGCCGCTCAACAACCCCATTATTACACGATGCCCAACCCTTTGCCCAATCCCCAAGCTGTGGCCCCACTTCCTCAGAATCAGTATTTGCCATCTGATCCACTGTATCGGATTCCACAGTCAACATCATCTCAGGTAACCCATTCCCCACCCATGCAACAATTTTCTCAGTATCAGCAGCAGCAGCAACAACAGCCACAATGGCCTCAACAGTTACCACAGCAGGTGCAACCTCTGCAACCGCCCTCAATGCAGTCTCAAATGAGACCCCCCTCAACAAATGTTTATACTCCATATCCTACAAGTCAAGCTACAAATCCACTTCCCACTGAAACACTGCCGAACAGCATGCCAATGCAACTGCCATACTCAGGGATTCCACCCCCAAGATCTAGTGCAATACCATATGGATATGGCGAAACTGGCAGAACAGTTCCACAGCAACCTCTGCCCCAGCAAGTCAAGAGCTCTTTTCCAGCACAACCAGGTGACGTATATGGAACTAGCGGGACCCACTCCTCCCTTCCTCCTGCAAGTGCATACATGGCATATGATGGAGAGGGTGGAAGAACACATTATCCACCCCAACCTTCTCATTATGCTCAAGGTGGATATCCTCCAACAAGTGCTTCCCTTCATAATCCTGCTCCACACAATATCATGGTTCGGAATCCTAGCCAGTCACATTATATTCGCAACCATCCCTACAATGAATTGGTTGAAAAAATGGTGAACATGGGATTCAGAGGCGATCATGTGGCAAGCGTTATCCAAAGGATGGAAGAAACTGGGCAGCCTTTAGATTTTAACTCCGTACTTGACCGGTTGAATGCTCCTACTTCAGTGGGTCCCCAGAGGGGATGGTCAGGGTAA 1578 0.4677 MASGPSGHGNGGSKGFDFGSDDILCSYEDDYINHDSSNGTHTDPSTKDFHISRMGRTSMLPATAYSSPEDSLGQDVIATVEKSMKTYADNVMRFLEGISLRLSQLELYCYNLDKSIGEMRSDLNSDHEEADTKLKSLDKHLQEVYRSVQILRDKQELAETQKELAKLQLVQKESSSSSHPQSNEERSSPSASDPKRTDNASDPRNQQLALALPHQVAPRQQPVAPPSQAQSPNVTQAAQQPHYYTMPNPLPNPQAVAPLPQNQYLPSDPLYRIPQSTSSQVTHSPPMQQFSQYQQQQQQQPQWPQQLPQQVQPLQPPSMQSQMRPPSTNVYTPYPTSQATNPLPTETLPNSMPMQLPYSGIPPPRSSAIPYGYGETGRTVPQQPLPQQVKSSFPAQPGDVYGTSGTHSSLPPASAYMAYDGEGGRTHYPPQPSHYAQGGYPPTSASLHNPAPHNIMVRNPSQSHYIRNHPYNELVEKMVNMGFRGDHVASVIQRMEETGQPLDFNSVLDRLNAPTSVGPQRGWSG* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1920 525 MobiDBLite consensus disorder prediction 215 348 - -
Apr2g1920 525 Coils Coil 150 170 - -
Apr2g1920 525 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 523 - -
Apr2g1920 525 MobiDBLite consensus disorder prediction 168 188 - -
Apr2g1920 525 MobiDBLite consensus disorder prediction 268 348 - -
Apr2g1920 525 MobiDBLite consensus disorder prediction 221 245 - -
Apr2g1920 525 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 523 - -
Apr2g1920 525 Pfam UBA-like domain (DUF1421) 471 513 IPR010820 -
Apr2g1920 525 MobiDBLite consensus disorder prediction 168 202 - -
Apr2g1920 525 MobiDBLite consensus disorder prediction 388 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1920 Apr-Chr2 24686844 24690664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1920 470 525 Trihelix Transcription Factor Family AT5G14540 34.375 6.10e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1920 - - gmx:100527106 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1920 2 24686844 24690664 Apr2g1920 2 24686844 24690664 ECH