Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1913 ATGTCTCCCGTTAAGTTTCTTGTCATTTGTCTTCACATTTTAACCATTTTGAGTTCAGTTTCCACTACTGAATTTGTCTATAACACAAACTTCAACTCCACAAACATCAATCTATATGGAAATGCCACTATTCAGAACTCTATTCTGACTCTCACTGATCAAAGTTTCTTCTCCATTGGTCGTGCTTTTTACCCTCATAAAATATCTACCAAACTACCCAACTCTTCTACCTTTCTCCCCTTTGCAACTTCCTTCATTTTCTCTGTTGGTCCTATCAAAAACTTTATTACTGGTCATGGCTTAGCCTTCGTGTTCACACCATCAAGAGGTGTAAATGGCACAACATCAGCTGAGTATCTTGGTCTTTTCAACCTCAGCAACGGAGGTACTCCTCAGAACCATGTTGTTGGAGTTGAGTTTGATACAGTTAGAAATGAAGAAGAATTCAATGATATAAATGACAATCATGTTGGTGTTGACATAAACTCACTTCATTCCTCAACTTCACATGAGGCTGGTTATTGGGGTGGAAAAGATAACAAGGAATTTAAGGTGTTGGAGATAAAAAATGGAGAAAACTATCAGGTATGGATTGAATATATGCATTCCCAGCTTAATGTTACTATGGCTGAGGCAGGGAAAAAGAAGCCTAGAGTGCCTCTTATCTGTAGTTATGTTAACCTTTCTGAGGTTCTTATGGATGAAACATACGTTGGATTCAGTGCAGCAACCGGGAGGATAGTAGACAGTGCTAAGATTCTTGCTTGGAGTTTTAGTAATTCAAATTTTTCAATCGCTGATGCTTTAGTGACAGAAAATTTGCCTTCATTTGTACATCATAAAGGGTGGTTTTCTAGAGCAAGAGCGATAGCTGTAGTGGTCACCAGTGTTTTTTGTGTGTTAATCATTGGTTGTGGTTATGCAGTGTTTTTCATCCACCACAAGGGAGACAAGGCAGAGGAAGAAATTGAAGACTGGGAACTTGAGTACTGGCCTCATAGGATTAGTTTCCATGAGATTGATGCAGCAATAAGGGGGTTCTCTGAAGAGAATGTGGTTGCTGTTGGAGGGAATGGGAAGGTATATAAAGGGGTTTTGCATGGAGTAGAAGTTGCTGTCAAGAGGATCCCACAAGAAAGAGAAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAAGCCTGGGCAGAATGAAACATAGAAACTTGGTAGGATTGAGAGGTTGGTGCAAAAAGGAAAAGGGATATTTAATTCTAGTTTATGACTTAATGCACAATGGAAGTTTAGACAAAAGGGTCTTTGAGTGTGAAGAGAAAATGATGCTAACTTGGGAAGAGAGGATTCAAGTTTTGAAAAATGTAGCCGCAGGGATTCTATACTTGCATGAGGGTTGGGAAGTTAAGGTTTTGCATAGAGACATCAAAGCAAGCAATGTTCTTCTTGACAAGAACATGACTGCTAGACTAGGAGATTTTGGATTAGCTTGTATGCATGAACATCGTGGACAAGTAGCCAGCACAACAAGAGTAATTGGAACAATAGGGTACATTGCTCCTGAAGTGATTCGAACAGGAACAGCATCAACTATGTCTGATGTGTTTGGTTTTGGAATATTGGTATTGGAAGTAATTTGTGGGAGAAGACCTATTGAAGAACACAAGCCAGGACTAATAGAATGGTTGGTGTCTCTAGTAGTGCAAGGCCAGTTGCACAGTGCTATTGATGGAAGGTTGAAGGCTAAAGGGGGATACACCATATTGGAAGCTGAGAGATTGCTTCATTTGGGTTTGTTGTGTTCAAATTCAGATCCTAGTATTAGACCAACAATGAGGCAAGTTGTGAAAATGCTGGAGGGGGATAAGGAAAGTGTTGAATCTGATGAAGAAAATATGGAAATGAGTCTGCTTGGAAGAATAAAATCAGCTGCAATGTGGTCTAGCACTGAATGCACTTCTCCATATAGTGGTCACCCTACTTTTGATGACATTAAAATGTTCAGTCTTAATTCTAGGACATCTGGAACTGGCTCAAGTACCATTCCAGGATCAGGATCACAATCAGAAAACAGGTAA 2070 0.3981 MSPVKFLVICLHILTILSSVSTTEFVYNTNFNSTNINLYGNATIQNSILTLTDQSFFSIGRAFYPHKISTKLPNSSTFLPFATSFIFSVGPIKNFITGHGLAFVFTPSRGVNGTTSAEYLGLFNLSNGGTPQNHVVGVEFDTVRNEEEFNDINDNHVGVDINSLHSSTSHEAGYWGGKDNKEFKVLEIKNGENYQVWIEYMHSQLNVTMAEAGKKKPRVPLICSYVNLSEVLMDETYVGFSAATGRIVDSAKILAWSFSNSNFSIADALVTENLPSFVHHKGWFSRARAIAVVVTSVFCVLIIGCGYAVFFIHHKGDKAEEEIEDWELEYWPHRISFHEIDAAIRGFSEENVVAVGGNGKVYKGVLHGVEVAVKRIPQEREEGMREFLAEVSSLGRMKHRNLVGLRGWCKKEKGYLILVYDLMHNGSLDKRVFECEEKMMLTWEERIQVLKNVAAGILYLHEGWEVKVLHRDIKASNVLLDKNMTARLGDFGLACMHEHRGQVASTTRVIGTIGYIAPEVIRTGTASTMSDVFGFGILVLEVICGRRPIEEHKPGLIEWLVSLVVQGQLHSAIDGRLKAKGGYTILEAERLLHLGLLCSNSDPSIRPTMRQVVKMLEGDKESVESDEENMEMSLLGRIKSAAMWSSTECTSPYSGHPTFDDIKMFSLNSRTSGTGSSTIPGSGSQSENR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1913 689 SUPERFAMILY Protein kinase-like (PK-like) 324 617 IPR011009 -
Apr2g1913 689 Pfam Protein kinase domain 351 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1913 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 261 IPR013320 -
Apr2g1913 689 MobiDBLite consensus disorder prediction 670 689 - -
Apr2g1913 689 Gene3D Transferase(Phosphotransferase) domain 1 423 640 - -
Apr2g1913 689 CDD lectin_legume_LecRK_Arcelin_ConA 23 261 IPR001220 GO:0030246
Apr2g1913 689 PANTHER - 1 678 - -
Apr2g1913 689 Pfam Legume lectin domain 23 262 IPR001220 GO:0030246
Apr2g1913 689 ProSitePatterns Legume lectins beta-chain signature. 136 142 IPR019825 -
Apr2g1913 689 PANTHER LECTIN RECEPTOR KINASE 1 678 - -
Apr2g1913 689 SMART serkin_6 347 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1913 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Apr2g1913 689 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1913 689 Gene3D Phosphorylase Kinase; domain 1 317 422 - -
Apr2g1913 689 Gene3D - 21 268 - -
Apr2g1913 689 CDD STKc_IRAK 356 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1913 Apr-Chr2 24625533 24627630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1913 20 564 Receptor kinase-like Gene Family AT4G04960 56.884 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr2g1913 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1913 - - gmx:100804553 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1049 3 25200219 25203940 Apr2g1913 2 24625533 24627630 PCT