Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1912 ATGTTTCCTCGTACTTTTTTCTTCATTCTTAACACAAATCTCGTTCTGAGTTCAGTGTCAGCAACTGAATTTGTTTATAACAGAAACTTCAACTCAACTAACGTAAAACTACATGGGAATGCCACCATTCAAAGTTCTATACTTACTCTTACAAATCAAACATTTTTCTCCATAGGTCGTGCTTTTTACCCTTATAGAATACCTATGAAACCACCCAACTCTTCTACCCTACTTCCCTTTGCAACCTCTTTTATCTTCTCCATTGCTCCGTGCAAGAACTTCCCTGTTGCTCATGGTTTTGCCTTTATTTTCTCTCCTGTGATGGCCATAAATGGAGAACTCTCGGGGAATTACTTGGGCCTTTTTAACCGCTCCACTTCAGGTAATGCTTCAAACCATGTTTTTGCTGTTGAGTTTGATGATTTTAGGAACGAAGAGTTCAATGAAGATAATGATAATCATGTGGGTGTGAACTTGAATTCAATGATTTCAATGTACTCTGAGCCTGCTGCGTTCTGGGGTGGGAAAGATGGTGAGGAATTGGAGAGTTTGAAACTGGCTAGTGGTCAAAACTATCAGGTTTGGATAGAGTTTGAAGATTCACAGATTAATGTTACTATGGCCCCAGCAGGGAAAAGGAAGCCTCATAGGCCTTTGATTAGTAAACCTATTAACCTTTCTTGGGTTTTGTTGGATGAAATGTATGTGGGGTTTTCTGGAGCAACAGGGAGAATGGTGGATATTTGTAGAATCTTGGCTTGGAGTTTTAGCAATTCTAACTTTTCAATTGGTGATGCTTTGAATACCAAACATTTGCCCATGTATATGCATCCAAGGGAATCGGTCTTTAGATCAAAAGGTGTCATTGTTGGTGTCATTTTTGGTGCACTTTTTGTCTGTGGTTGCTGCTGCACTTTGGTGTTTTTCTGTTTGTTTAGAACCAGAAGGGATGAGAAGCAGGAGAAATTTGAGGATTGGGAATTGGAGTATTGGCCTCACAGGATTAGCTATCAGGAGATTTGTGATGCAACAAGTGGATTTTCTGAAGAGAAAGTGATTGGGATTGGAACAAGTGGGAAAGTATACAAAGGAGTTCTGAAAGGAGTTGAGGTTGCAGTGAAGAGAATCAATCATGAGACTCAGCATGGAATGAGAGAGTTTCTGGCAGAGATTTCAAGCCTAGGAAGAATGAAACACAGAAATTTAGTTGGGTTCAGAGGTTGGAGTAAAAAGAAAGGAGGAAAATTGATACTGGTTTATGATTACATGGTGAATGAGAGCTTAGACAAAAGGATCTTTGAGTGTGCAGAGACCATGTTGCTAAGCTGGGAAGAAAGAATTAGAGTTTTGCAAAATGTTGCCTGTGGAATTTTATATCTACATGAGGGTTGGGAAGTTGAGGTCTTGCATAGGGATATCAAATCCTGTAATGTGCTACTTGACAAGGACATGAATGCTAGATTGGGGGATTTTGGGCTTGCAAGGCTGCATCATCAGGAACACGTGGCTGACACAACAAGAGTGATAGGGACTTTGGGGTACATGGCACCAGAACTAGTCCGAATTGGAAGGCCATCAACTGCAAGTGATGTGTTTAGTTTTGGAGTATTGATTTTAGAAGTTGTGTGTGGGAGAAGACCAATTATAGCAGATCAGCCACCATTGGTTGATTGGGTATTTTCCCTTATGGAGAAAGGGGAATTGAATTTTGCCACTGATGAGCGTTTAAAGGCTCAAAGTGGATATAATGCCGATGAAGCTGAGAGGCTACTTCATTTGGGTTTGTTATGTGCAAGTTTAGAGCCTAGTATTAGGCCAACAATGAGGCAAGTGGTGAAAGCATTGGAGGGAATAAAATGCACTGAGTGTAATGAAGAGTGCATCCATATGGGTCTGCTTGGAAAAATAAACTCAGCAGCATCATGGTCTAAGAGTTCTTCAAGTTCTGCCAATGCAAGTTATCCGACTTTTGATGAAATTTTGCAGACCAAGTTTTATTCTACAGCATCTTTAAGCATATCTTGCCCCAGCCCACAACCAGAGTCAGATTTTATCTCAGAAGGAAGGTGA 2070 0.4053 MFPRTFFFILNTNLVLSSVSATEFVYNRNFNSTNVKLHGNATIQSSILTLTNQTFFSIGRAFYPYRIPMKPPNSSTLLPFATSFIFSIAPCKNFPVAHGFAFIFSPVMAINGELSGNYLGLFNRSTSGNASNHVFAVEFDDFRNEEFNEDNDNHVGVNLNSMISMYSEPAAFWGGKDGEELESLKLASGQNYQVWIEFEDSQINVTMAPAGKRKPHRPLISKPINLSWVLLDEMYVGFSGATGRMVDICRILAWSFSNSNFSIGDALNTKHLPMYMHPRESVFRSKGVIVGVIFGALFVCGCCCTLVFFCLFRTRRDEKQEKFEDWELEYWPHRISYQEICDATSGFSEEKVIGIGTSGKVYKGVLKGVEVAVKRINHETQHGMREFLAEISSLGRMKHRNLVGFRGWSKKKGGKLILVYDYMVNESLDKRIFECAETMLLSWEERIRVLQNVACGILYLHEGWEVEVLHRDIKSCNVLLDKDMNARLGDFGLARLHHQEHVADTTRVIGTLGYMAPELVRIGRPSTASDVFSFGVLILEVVCGRRPIIADQPPLVDWVFSLMEKGELNFATDERLKAQSGYNADEAERLLHLGLLCASLEPSIRPTMRQVVKALEGIKCTECNEECIHMGLLGKINSAASWSKSSSSSANASYPTFDEILQTKFYSTASLSISCPSPQPESDFISEGR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1912 689 CDD lectin_legume_LecRK_Arcelin_ConA 22 259 IPR001220 GO:0030246
Apr2g1912 689 SUPERFAMILY Protein kinase-like (PK-like) 322 616 IPR011009 -
Apr2g1912 689 SMART serkin_6 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1912 689 PANTHER LECTIN RECEPTOR KINASE 7 672 - -
Apr2g1912 689 Gene3D Transferase(Phosphotransferase) domain 1 423 631 - -
Apr2g1912 689 CDD STKc_IRAK 353 618 - -
Apr2g1912 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Apr2g1912 689 ProSiteProfiles Protein kinase domain profile. 347 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1912 689 Pfam Legume lectin domain 22 260 IPR001220 GO:0030246
Apr2g1912 689 ProSitePatterns Protein kinases ATP-binding region signature. 353 374 IPR017441 GO:0005524
Apr2g1912 689 Gene3D - 20 270 - -
Apr2g1912 689 Pfam Protein kinase domain 348 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1912 689 Gene3D Phosphorylase Kinase; domain 1 310 422 - -
Apr2g1912 689 PANTHER - 7 672 - -
Apr2g1912 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 262 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1912 Apr-Chr2 24621828 24624367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1912 19 572 Receptor kinase-like Gene Family AT4G04960 55.357 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr2g1912 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1912 - - gmx:100804025 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1912 2 24621828 24624367 Apr2g1912 2 24621828 24624367 ECH
Apr2g1912 2 24621828 24624367 Apr3g1049 3 25200219 25203940 PCT