Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1910 ATGGATAATCAGCAGCGAGATCCTTCAGCCAAAGGAATCGAAAGAAAGATCATAGAAAAAAACAGGAGAAACCAAATGAAGAAGCTTTGTTCCGAACTCAACTCTCTTCTCCCAGCTAACAATAATCTCAAGGCCTCTTCTCGCTCTCGACCTCTATCTCTTTTTCTCTCCATCGATATCCTTGGAGAGTCATCTCGCGCTGACCAAATAGACGAGGCTATCTGCTATATCAAGAGCCTAGAGACAAAGGTGAAGATAGCGCAGGAGAAGAAAGAAAGCTTAGTGAAAGGGAAGAGATCTCGTAGTCATGACAGTTCCAGTGGTTCTGAAGTACCAAAAATTGAGATTCATCAAATGGCTTCCTCGCTAATAATCATTCTAATGTGTGGTTTCAATGATCAGTTCATTTTCACTGAAATTATTCGCATACTGCATGAAGAGAACATTGAGGTCAAGAGTGCCCATTCTTCACGTGCAGGAAACTCAATGCAACACGTAGTGCACATAGAAATTCAGCAATCATTTCAAGGAGGAAAAACTGCATTGAATGAGAGATTGAAAAGGTTTGTGCTGGACAATGAGAACTTTTTAGCTAGGCGCATAGCTTCCCCCTTTTTTTCCCCTCGTAGTGGTTAA 636 0.4151 MDNQQRDPSAKGIERKIIEKNRRNQMKKLCSELNSLLPANNNLKASSRSRPLSLFLSIDILGESSRADQIDEAICYIKSLETKVKIAQEKKESLVKGKRSRSHDSSSGSEVPKIEIHQMASSLIIILMCGFNDQFIFTEIIRILHEENIEVKSAHSSRAGNSMQHVVHIEIQQSFQGGKTALNERLKRFVLDNENFLARRIASPFFSPRSG* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1910 211 MobiDBLite consensus disorder prediction 91 110 - -
Apr2g1910 211 Coils Coil 77 97 - -
Apr2g1910 211 MobiDBLite consensus disorder prediction 91 111 - -
Apr2g1910 211 Gene3D - 11 85 IPR036638 GO:0046983
Apr2g1910 211 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 97 IPR036638 GO:0046983
Apr2g1910 211 Pfam Helix-loop-helix DNA-binding domain 15 81 IPR011598 GO:0046983
Apr2g1910 211 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 80 IPR011598 GO:0046983
Apr2g1910 211 SMART finulus 16 86 IPR011598 GO:0046983
Apr2g1910 211 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 10 196 - -
Apr2g1910 211 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 196 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1910 Apr-Chr2 24603955 24605018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1910 10 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 34.536 1.85e-23 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr2g1910 HLH 1.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1910 - - aprc:113855892 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1910 2 24603955 24605018 Apr2g1910 2 24603955 24605018 ECH