Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1909 ATGGATCGTCAACAGAGAAGCCAACCTTCTTCTTCCGAAGGAATCGAAAGAAGGATCGTAGAAAAAAACAGGAGAAACCATATGAAGAACCTCTATTCCTGTCTCAACTCTCTTCTCCCTAACTATAATCCCATGGAAGTGATAGCGGTGCCCGATCAAATAGATGAAGCTATCAACTACATCAGAAGCCTAGAGACAAAGGTGAAGATGATTCAGGAGAAGAAAGAAAGCTTAATGGCAAGGAAGAGAACTCTAAGTGGTTGCTCGAGTTCACAAGGTAGCCAAAAATCGCCAAAAATCGAGGTTCATGAAATGGGTTACTCGCTTGAAGTGATTCTAACATGCGGGTTTGATAACCAGTTTATTTTCTATGAAATTATTCGAATATTGCATGACGAGAACGTCGAGGTCATATCTGCCAATTATTCAATGGCTGGAGATTCAGTGCTTCATATCTTGCACGGGGAGATTCCGCAATCTTACTTTCAATTTGGAGCGACCAAAGTAAGTGAGAGGTTGAAAGGGTTTGCGAACGGATCCCTCGGTGATGTGGAAATAGATAGATGCAGAAATGTGGGATTTTGA 585 0.4171 MDRQQRSQPSSSEGIERRIVEKNRRNHMKNLYSCLNSLLPNYNPMEVIAVPDQIDEAINYIRSLETKVKMIQEKKESLMARKRTLSGCSSSQGSQKSPKIEVHEMGYSLEVILTCGFDNQFIFYEIIRILHDENVEVISANYSMAGDSVLHILHGEIPQSYFQFGATKVSERLKGFANGSLGDVEIDRCRNVGF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1909 194 Gene3D - 6 92 IPR036638 GO:0046983
Apr2g1909 194 MobiDBLite consensus disorder prediction 1 20 - -
Apr2g1909 194 Coils Coil 54 81 - -
Apr2g1909 194 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 64 IPR011598 GO:0046983
Apr2g1909 194 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 18 90 IPR036638 GO:0046983
Apr2g1909 194 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 184 IPR015660 GO:0003700|GO:0006357
Apr2g1909 194 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 9 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1909 Apr-Chr2 24583402 24584416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1909 7 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.634 7.95e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1909 - - gmx:100817883 244.588